Clone BS24318 Report

Search the DGRC for BS24318

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:243
Well:18
Vector:pDNR-Dual
Associated Gene/TranscriptCG9184-RA
Protein status:BS24318.pep: gold
Sequenced Size:761

Clone Sequence Records

BS24318.complete Sequence

761 bp assembled on 2011-02-01

GenBank Submission: KX805185

> BS24318.complete
GAAGTTATCAGTCGACATGGATCGGAGAGTGACTGCGATTGGTTTGGTTA
TCCTGCAGCTGCTGGTCAGCGGCCTCTGTTTCCAGGAGAAGGCGCCACTG
CAGACGAGCCTGGTCAGCGGACAGGCCAGGACCGAAAAGCAGCAACAGGT
GCTGGACGATCCGCTGGGAAGTGGACGCGGGATTGACGAGCACCTGCTGA
AGACCATTGGTAAGGGCGGCATCAAGCTGGTGATGGCCTCGGGAGCCCCG
TCGACCACCCCGAAACCGTCAGTACAACACCATTACTATTATCCACCAGA
GGATCAGCAGCACCCACGGCAGTATGGCTATCCACCGCAGTGGTCGCCAG
GACCGCCCGCTTATCCGCCGCCACCGCAGCGTCCTTGGGGGCCACCCCCT
CCGCCCGGACCACCGCCGCCAGGACCTCCTCCTCCGCCGGGACCCTACTA
CAATCCCTACTACAATGGCTACAACTACTACGGCGGATATGGCGGCTATG
GATATGGGGGCTTTGGATATCCCGGCTTTGGCGGCTATTCTGGCTATCCC
TACTATCCCTTCTATCGCTCCTCGACGGCTGGCGAGGTCGATAACCAACT
TCCCGGTGCCGATGGACTCACTTCCGCCGCCATTCCTGGCGTTTTCCAGG
GCAGGGCCGTGCTGTCCCACCAGAACTTCCTCGACGGCAGGAACAACGCT
AACGTTGTGCCACTTTATCACCTACTCCAAATGGCCAGGGCTTGAAAGCT
TTCTAGACCAT

BS24318.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:53:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG9184-RA 729 CG9184-PA 1..729 17..745 3645 100 Plus
CG9184-RB 639 CG9184-PB 193..639 299..745 2235 100 Plus
CG9184-RB 639 CG9184-PB 1..193 17..209 965 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:53:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG9184-RA 966 CG9184-RA 24..754 16..746 3655 100 Plus
CG9184-RB 876 CG9184-RB 217..664 299..746 2240 100 Plus
CG9184-RB 876 CG9184-RB 24..217 16..209 970 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:53:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1322004..1322703 746..47 3500 100 Minus
Blast to na_te.dros performed on 2014-11-26 21:53:56 has no hits.

BS24318.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 16:02:03 Download gff for BS24318.complete
Subject Subject Range Query Range Percent Splice Strand
CG9184-RA 21..748 17..744 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:40:11 Download gff for BS24318.complete
Subject Subject Range Query Range Percent Splice Strand
CG9184-RA 25..752 17..744 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:45:22 Download gff for BS24318.complete
Subject Subject Range Query Range Percent Splice Strand
CG9184-RA 25..752 17..744 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:45:22 Download gff for BS24318.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1322752..1322782 17..47 100   Minus
3L 1322006..1322702 48..744 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:40:11 Download gff for BS24318.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1322752..1322782 17..47 100   Minus
arm_3L 1322006..1322702 48..744 100 <- Minus

BS24318.pep Sequence

Translation from 16 to 744

> BS24318.pep
MDRRVTAIGLVILQLLVSGLCFQEKAPLQTSLVSGQARTEKQQQVLDDPL
GSGRGIDEHLLKTIGKGGIKLVMASGAPSTTPKPSVQHHYYYPPEDQQHP
RQYGYPPQWSPGPPAYPPPPQRPWGPPPPPGPPPPGPPPPPGPYYNPYYN
GYNYYGGYGGYGYGGFGYPGFGGYSGYPYYPFYRSSTAGEVDNQLPGADG
LTSAAIPGVFQGRAVLSHQNFLDGRNNANVVPLYHLLQMARA*

BS24318.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG9184-PA 242 CG9184-PA 1..242 1..242 1363 100 Plus
CG9184-PB 212 CG9184-PB 1..212 1..242 1155 87.6 Plus
CG33003-PA 579 CG33003-PA 397..500 73..155 153 32.7 Plus
CG33003-PB 604 CG33003-PB 422..525 73..155 153 32.7 Plus
CG10555-PB 926 CG10555-PB 405..533 41..178 149 32.9 Plus