BS24318.complete Sequence
761 bp assembled on 2011-02-01
GenBank Submission: KX805185
> BS24318.complete
GAAGTTATCAGTCGACATGGATCGGAGAGTGACTGCGATTGGTTTGGTTA
TCCTGCAGCTGCTGGTCAGCGGCCTCTGTTTCCAGGAGAAGGCGCCACTG
CAGACGAGCCTGGTCAGCGGACAGGCCAGGACCGAAAAGCAGCAACAGGT
GCTGGACGATCCGCTGGGAAGTGGACGCGGGATTGACGAGCACCTGCTGA
AGACCATTGGTAAGGGCGGCATCAAGCTGGTGATGGCCTCGGGAGCCCCG
TCGACCACCCCGAAACCGTCAGTACAACACCATTACTATTATCCACCAGA
GGATCAGCAGCACCCACGGCAGTATGGCTATCCACCGCAGTGGTCGCCAG
GACCGCCCGCTTATCCGCCGCCACCGCAGCGTCCTTGGGGGCCACCCCCT
CCGCCCGGACCACCGCCGCCAGGACCTCCTCCTCCGCCGGGACCCTACTA
CAATCCCTACTACAATGGCTACAACTACTACGGCGGATATGGCGGCTATG
GATATGGGGGCTTTGGATATCCCGGCTTTGGCGGCTATTCTGGCTATCCC
TACTATCCCTTCTATCGCTCCTCGACGGCTGGCGAGGTCGATAACCAACT
TCCCGGTGCCGATGGACTCACTTCCGCCGCCATTCCTGGCGTTTTCCAGG
GCAGGGCCGTGCTGTCCCACCAGAACTTCCTCGACGGCAGGAACAACGCT
AACGTTGTGCCACTTTATCACCTACTCCAAATGGCCAGGGCTTGAAAGCT
TTCTAGACCAT
BS24318.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:53:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9184-RA | 729 | CG9184-PA | 1..729 | 17..745 | 3645 | 100 | Plus |
CG9184-RB | 639 | CG9184-PB | 193..639 | 299..745 | 2235 | 100 | Plus |
CG9184-RB | 639 | CG9184-PB | 1..193 | 17..209 | 965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:53:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9184-RA | 966 | CG9184-RA | 24..754 | 16..746 | 3655 | 100 | Plus |
CG9184-RB | 876 | CG9184-RB | 217..664 | 299..746 | 2240 | 100 | Plus |
CG9184-RB | 876 | CG9184-RB | 24..217 | 16..209 | 970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:53:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1322004..1322703 | 746..47 | 3500 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:53:56 has no hits.
BS24318.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 16:02:03 Download gff for
BS24318.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9184-RA | 21..748 | 17..744 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:40:11 Download gff for
BS24318.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9184-RA | 25..752 | 17..744 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:45:22 Download gff for
BS24318.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9184-RA | 25..752 | 17..744 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:45:22 Download gff for
BS24318.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1322752..1322782 | 17..47 | 100 | | Minus |
3L | 1322006..1322702 | 48..744 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:40:11 Download gff for
BS24318.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1322752..1322782 | 17..47 | 100 | | Minus |
arm_3L | 1322006..1322702 | 48..744 | 100 | <- | Minus |
BS24318.pep Sequence
Translation from 16 to 744
> BS24318.pep
MDRRVTAIGLVILQLLVSGLCFQEKAPLQTSLVSGQARTEKQQQVLDDPL
GSGRGIDEHLLKTIGKGGIKLVMASGAPSTTPKPSVQHHYYYPPEDQQHP
RQYGYPPQWSPGPPAYPPPPQRPWGPPPPPGPPPPGPPPPPGPYYNPYYN
GYNYYGGYGGYGYGGFGYPGFGGYSGYPYYPFYRSSTAGEVDNQLPGADG
LTSAAIPGVFQGRAVLSHQNFLDGRNNANVVPLYHLLQMARA*
BS24318.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9184-PA | 242 | CG9184-PA | 1..242 | 1..242 | 1363 | 100 | Plus |
CG9184-PB | 212 | CG9184-PB | 1..212 | 1..242 | 1155 | 87.6 | Plus |
CG33003-PA | 579 | CG33003-PA | 397..500 | 73..155 | 153 | 32.7 | Plus |
CG33003-PB | 604 | CG33003-PB | 422..525 | 73..155 | 153 | 32.7 | Plus |
CG10555-PB | 926 | CG10555-PB | 405..533 | 41..178 | 149 | 32.9 | Plus |