Clone BS24319 Report

Search the DGRC for BS24319

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:243
Well:19
Vector:pDNR-Dual
Associated Gene/TranscriptCG14960-RA
Protein status:BS24319.pep: full length peptide match
Sequenced Size:1028

Clone Sequence Records

BS24319.complete Sequence

1028 bp assembled on 2011-02-03

GenBank Submission: KX804481

> BS24319.complete
GAAGTTATCAGTCGACATGTTTCTCACAAAGAGTTCAAGTGCGCGGCACT
CGTTGCTGCTGCTTCTGTTGGCCTTTTGCTGCCTGAGCAATGCCTTTGCA
GCCAAGATAACGAAGAAGGTCGAAAAAACGTCGGAAAAGCCAGAGGTGGA
GGCTGCTGCATCGCCAATCGAGGAGGAAAATGACGATGAAGATGCTGGCG
AGGATGGTGATGACGACGACGACGACGAGGAGGAGGAGACGGGGGAACCT
GCGGTGGATGCGGCTGACAAAGAAGCTGCAGTAGGGGCATCGAGTAACAA
GAACCCCAATGCAGTGCAGGCAGCCACGGATCCCACAGATCTCAGTGTCT
GGGGCATGGTTCGCACTCTGTGGGGCTGGCTTCGTAGCGATCTGAGTGAA
AGCCTATTCGGCGATGACGACGACGGGAAGCCCGCGTCCGGCAGCTCAGC
TGTGGAGGGTCGTACCTTTGGCAAAATCCGCCGTCTTCAAATGGCTTTGA
TACCCATTATCTTTAAGTTTGGCGTCCTTTCGGCTATGGTTGCCTTTCTG
GTCGCCATTGGTATGAAGTCTCTGTTCCTGCTCAAGGTCTTAGTGGTTAT
GAATGCCATTGCCATTCTGGGAAAGTTCATTACCCTGAAGTCCAGTCTAT
TTGGACAGTATGAGAACACGGCGCCGTCCTTCAATTACCCGGGCTGGAAT
CCTCATGCCAAGGAGTCGTGGGGCACCACTGGATTGAGTGGTCATGGCGC
TGGTCATCCACCCAGCAAGGAGATTCACCTGCACATCCACGGAAATGCCC
AGACCCAGGCTCAGCTCGCCGGTCAGGGCTATCAGTATGAATCGCAGTCG
GGTGGATGGGCCAGTCGATCGGATCCATATGGAGCCTATGCACCCACGGG
CCAATTCACCGATAGCCAGCCCGTGGGAGCAGTGGCCGGAGAGGTGCCCA
ACAATACGGATCCCATGTCCCTGCTGCCCACGAAATATCGGGCGAGACAA
CTCATCCGCTGAAAGCTTTCTAGACCAT

BS24319.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:57:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG14960-RA 996 CG14960-PA 1..996 17..1012 4965 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG14960-RA 1444 CG14960-RA 242..1237 17..1012 4965 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:28
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3275491..3276048 455..1012 2775 99.8 Plus
3L 28110227 3L 3274044..3274480 19..455 2185 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:57:28 has no hits.

BS24319.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:19 Download gff for BS24319.complete
Subject Subject Range Query Range Percent Splice Strand
CG14960-RA 246..1234 23..1011 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:39:54 Download gff for BS24319.complete
Subject Subject Range Query Range Percent Splice Strand
CG14960-RA 248..1236 23..1011 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:14:41 Download gff for BS24319.complete
Subject Subject Range Query Range Percent Splice Strand
CG14960-RA 248..1236 23..1011 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:14:41 Download gff for BS24319.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3274048..3274480 23..455 100 -> Plus
3L 3275492..3276047 456..1011 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:39:54 Download gff for BS24319.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3274048..3274480 23..455 100 -> Plus
arm_3L 3275492..3276047 456..1011 99   Plus

BS24319.pep Sequence

Translation from 16 to 1011

> BS24319.pep
MFLTKSSSARHSLLLLLLAFCCLSNAFAAKITKKVEKTSEKPEVEAAASP
IEEENDDEDAGEDGDDDDDDEEEETGEPAVDAADKEAAVGASSNKNPNAV
QAATDPTDLSVWGMVRTLWGWLRSDLSESLFGDDDDGKPASGSSAVEGRT
FGKIRRLQMALIPIIFKFGVLSAMVAFLVAIGMKSLFLLKVLVVMNAIAI
LGKFITLKSSLFGQYENTAPSFNYPGWNPHAKESWGTTGLSGHGAGHPPS
KEIHLHIHGNAQTQAQLAGQGYQYESQSGGWASRSDPYGAYAPTGQFTDS
QPVGAVAGEVPNNTDPMSLLPTKYRARQLIR*

BS24319.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:06:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG14960-PA 331 CG14960-PA 1..331 1..331 1719 100 Plus