BS24325.complete Sequence
2033 bp assembled on 2011-02-15
GenBank Submission: KX803852
> BS24325.complete
GAAGTTATCAGTCGACATGCGATTACGCCGCCGTTGGCCGCGAAGGATGC
GGCGTGCCATGGAACAACTGCGTCTCCAGTCCCGCCGGAAGCTGCTGGCG
CTCACGATGACTGGAGGACTCTGCCTGGCTATCTGGGTAGTTGCCAACTA
TCTGTCCGCATCGGAGGAGGGCCAAACCGGCGGCTTCAGCAGCGCCTGCA
CTGCCATCGATGCGGTTTACACGTGGGTCAATGGCTCGGATCCCAACTTT
ATTGAGGACATCCGGCGATTCGATGACAAGTACGATCCCTCGCGGTTCGA
TGACAAGAATGAGCTGCGGTACTCTCTGAGGTCCCTGGAAAAACACGCCG
CATGGATCAGGCATGTGTACATAGTAACCAATGGCCAGATTCCAAGTTGG
CTGGATCTCAGCTACGAAAGGGTCACGGTGGTGCCCCACGAAGTCCTGGC
TCCCGATCCCGACCAGCTGCCCACCTTCTCCAGCTCGGCCATCGAGACAT
TTCTGCACCGCATACCAAAGCTGTCCAAGAGGTTCCTCTACCTCAACGAC
GACATATTCCTGGGAGCTCCGCTGTATCCGGAGGACTTGTACACTGAAGC
GGAGGGAGTTCGCGTGTACCAGGCATGGATGGTGCCCGGCTGCGCCTTGG
ATTGCCCCTGGACGTACATAGGTGATGGAGCTTGCGATCGGCACTGCAAC
ATTGATGCGTGCCAATTTGATGGAGGCGACTGCAGTGAAACTGGGCCAGC
GAGCGATGCCCACGTCATTCCACCAAGCAAAGAAGTGCTCGAGGTGCAGC
CTGCCGCTGTTCCACAATCAAGAGTCCACCGATTTCCTCAGATGGGTCTC
CAAAAGCTGTTCAGGCGCAGCTCTGCCAATTTTAAGGATGTTATGCGGCA
CCGCAATGTGTCCACACTCAAGGAACTACGTCGCATTGTGGAGCGTTTTA
ACAAGGCCAAACTCATGTCGCTGAACCCCGAACTGGAGACCTCCAGCTCC
GAGCCACAGACAACTCAGCGCCACGGGCTGCGCAAGGAGGATTTTAAGTC
TTCCACCGATATTTACTCTCACTCGCTGATTGCCACCAATATGTTGCTGA
ATAGAGCCTATGGCTTTAAGGCACGCCATGTCCTGGCGCACGTGGGCTTC
CTAATTGACAAGGATATTGTGGAGGCCATGCAGCGACGTTTTCACCAGCA
AATTCTGGACACTGCCCATCAGCGCTTCCGAGCCCCAACAGATTTGCAGT
ACGCATTCGCTTACTACTCCTTCCTAATGAGCGAAACCAAAGTAATGAGT
GTAGAGGAAATCTTCGATGAGTTCGACACGGACGGTTCGGCCACCTGGTC
GGATCGAGAGGTGCGAACCTTTCTCACTCGCATCTATCAGCCGCCACTTG
ACTGGTCTGCCATGCGCTACTTCGAGGAGGTGGTTCAAAACTGCACAAGA
AATCTGGGCATGCATTTAAAAGTGGACACAGTCGAACACTCCACGCTGGT
CTACGAGCGATACGAGGACTCTAATTTGCCTACAATAACCAGGGATTTGG
TTGTCCGATGTCCACTTCTGGCCGAAGCTTTGGCGGCAAACTTTGCAGTC
CGACCCAAATATAACTTCCATGTCAGCCCAAAAAGAACTTCGCACAGCAA
TTTTATGATGCTCACATCGAATCTCACGGAGGTGGTGGAGTCACTGGACC
GATTGCGTCGGAATCCGCGCAAGTTTAACTGCATCAACGACAATCTGGAT
GCCAATAGAGGCGAAGACAACGAGATGGTGCGCCATCTGCTCGAGGACTT
TTACCTCTCCTTCTTTCCGAGACGCAGCAAGTTCGAGCTGCCGCCGCAAT
ATCGTAATCGGTTCGAGTCCTGGCGGGACTTTCAGCGCTGGAAGAGAAGA
AAGCGGGCGGTTCTCGTGATTGGATATGGAGTGAGTCTGCTGCTTGTGGT
CTGTCTGCTGCGATTCATGTGCCACCACAAGGCGAAGCTGGTGAGGCGCT
GTGTGCAGCGCTTGTAGAAGCTTTCTAGACCAT
BS24325.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 02:01:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8027-RA | 2001 | CG8027-PA | 1..2001 | 17..2017 | 10005 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:01:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8027-RA | 2597 | CG8027-RA | 101..2101 | 17..2017 | 10005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 02:01:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9205452..9206872 | 1528..108 | 7105 | 100 | Minus |
| 2R | 25286936 | 2R | 9204906..9205395 | 2017..1528 | 2450 | 100 | Minus |
| 2R | 25286936 | 2R | 9206934..9207024 | 107..17 | 455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 02:01:31 has no hits.
BS24325.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-15 10:19:45 Download gff for
BS24325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8027-RA | 98..2098 | 17..2017 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:07:37 Download gff for
BS24325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8027-RA | 101..2101 | 17..2017 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:36:10 Download gff for
BS24325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8027-RA | 101..2101 | 17..2017 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:36:10 Download gff for
BS24325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9204906..9205394 | 1529..2017 | 100 | <- | Minus |
| 2R | 9205452..9206872 | 108..1528 | 100 | <- | Minus |
| 2R | 9206934..9207024 | 17..107 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:07:37 Download gff for
BS24325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5092411..5092899 | 1529..2017 | 100 | <- | Minus |
| arm_2R | 5092957..5094377 | 108..1528 | 100 | <- | Minus |
| arm_2R | 5094439..5094529 | 17..107 | 100 | | Minus |
BS24325.pep Sequence
Translation from 16 to 2016
> BS24325.pep
MRLRRRWPRRMRRAMEQLRLQSRRKLLALTMTGGLCLAIWVVANYLSASE
EGQTGGFSSACTAIDAVYTWVNGSDPNFIEDIRRFDDKYDPSRFDDKNEL
RYSLRSLEKHAAWIRHVYIVTNGQIPSWLDLSYERVTVVPHEVLAPDPDQ
LPTFSSSAIETFLHRIPKLSKRFLYLNDDIFLGAPLYPEDLYTEAEGVRV
YQAWMVPGCALDCPWTYIGDGACDRHCNIDACQFDGGDCSETGPASDAHV
IPPSKEVLEVQPAAVPQSRVHRFPQMGLQKLFRRSSANFKDVMRHRNVST
LKELRRIVERFNKAKLMSLNPELETSSSEPQTTQRHGLRKEDFKSSTDIY
SHSLIATNMLLNRAYGFKARHVLAHVGFLIDKDIVEAMQRRFHQQILDTA
HQRFRAPTDLQYAFAYYSFLMSETKVMSVEEIFDEFDTDGSATWSDREVR
TFLTRIYQPPLDWSAMRYFEEVVQNCTRNLGMHLKVDTVEHSTLVYERYE
DSNLPTITRDLVVRCPLLAEALAANFAVRPKYNFHVSPKRTSHSNFMMLT
SNLTEVVESLDRLRRNPRKFNCINDNLDANRGEDNEMVRHLLEDFYLSFF
PRRSKFELPPQYRNRFESWRDFQRWKRRKRAVLVIGYGVSLLLVVCLLRF
MCHHKAKLVRRCVQRL*
BS24325.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:12:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8027-PA | 666 | CG8027-PA | 1..666 | 1..666 | 3527 | 100 | Plus |
