BS24327.complete Sequence
1055 bp assembled on 2011-02-03
GenBank Submission: KX802764
> BS24327.complete
GAAGTTATCAGTCGACATGGCAACCGGCGGAAATAACTCGACCTTTGACC
TCAGTCCCAAGACCCTGGCGGCCGTGGGCGTGGGCCTGGTGGCGGTGGGC
GGGGCTAGCTTCCTACTGTACCGCCATCTGACCCGCGATGTGGTTCCCCA
AAAGTGGCGACGCGTGGGCACCGTGGAGAGGATACACTTTTTTCCGGTCA
AGTCCTGTGCCCCTATGGACATCTCGAAGCCCGGAGTGGAGTACGACTGC
GATGTACTGAGCATGTCCTTTGAGGGAATAAGGGATCGCACCTTGATGGT
GGTCAATGAAAAGAACGAAATGATCACGGCTCGGGTGTATCCGCTTATGA
CCCAGATCAAGTCGAAGAAGGTGTCGCCCAGCAAGCTTGTGTTCAGCGCC
CAGGACATGCCAGACCTGGAGCTGGACTTCGAGAAGCTGGACGGTCCTGG
CAAGGATGTGAAAACTTCCGTTTGGGGCGTTTCCATAGACGTGATGCCCT
GCGGAGATCGGATCAACACGTGGTTCTCCCAGGCCATCCTGAAGAAGGAG
AGCGGCCTCAAGCTAGTTCACTATCCCTATCCGAAACCAGTGAGATGCAC
CAATCCCCGCCTAAAGTCCATGCCATTCATTAGACAGGAGGACTCGGGCA
CTTTTAACGATGCCACCAGCTTTATGCTGATGAACCTTTCGTCGGTCGCC
GATCTTAATACTCGGTTAAAGAATCCGGTGGATGCACTGCAGTTCCGAGG
TAACTTCGAACTGAAAATGGATGTTGATGAGCCCTATGCCGAGGACAATT
GGCAGTGGGTGCGTATAGGCGAAGATGCTGTTTTCCGTACGGTGGCGCCA
TGCACTCGCTGTATTTTTACCAACATTAATGCGAAGACCGCAGAGAGGAG
TTCCGAAGGAGAGCCTCTCAAAACGCTCAGAAGCTATCGCTTGTTCAACT
ACAGTTCGCCGGCTCTGGGCGTTCATATGGGACTTCGGCTGCCGGGAAAG
GTGAAGGCCAACGACGTCGTGTATGTGGAGGACAAGTGAAAGCTTTCTAG
ACCAT
BS24327.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:57:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1665-RA | 1023 | CG1665-PA | 1..1023 | 17..1039 | 5115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1665-RA | 1189 | CG1665-RA | 53..1076 | 17..1040 | 5120 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9839889..9840516 | 20..647 | 3125 | 99.8 | Plus |
| 2R | 25286936 | 2R | 9840583..9840870 | 646..933 | 1440 | 100 | Plus |
| 2R | 25286936 | 2R | 9840942..9841050 | 932..1040 | 545 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:57:25 has no hits.
BS24327.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:18 Download gff for
BS24327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1665-RA | 51..1072 | 17..1038 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:39:53 Download gff for
BS24327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1665-RA | 53..1074 | 17..1038 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:14:40 Download gff for
BS24327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1665-RA | 53..1074 | 17..1038 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:14:40 Download gff for
BS24327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9839887..9840515 | 17..646 | 99 | -> | Plus |
| 2R | 9840584..9840870 | 647..933 | 100 | -> | Plus |
| 2R | 9840944..9841048 | 934..1038 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:39:53 Download gff for
BS24327.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5727392..5728020 | 17..646 | 99 | -> | Plus |
| arm_2R | 5728089..5728375 | 647..933 | 100 | -> | Plus |
| arm_2R | 5728449..5728553 | 934..1038 | 100 | | Plus |
BS24327.pep Sequence
Translation from 16 to 1038
> BS24327.pep
MATGGNNSTFDLSPKTLAAVGVGLVAVGGASFLLYRHLTRDVVPQKWRRV
GTVERIHFFPVKSCAPMDISKPGVEYDCDVLSMSFEGIRDRTLMVVNEKN
EMITARVYPLMTQIKSKKVSPSKLVFSAQDMPDLELDFEKLDGPGKDVKT
SVWGVSIDVMPCGDRINTWFSQAILKKESGLKLVHYPYPKPVRCTNPRLK
SMPFIRQEDSGTFNDATSFMLMNLSSVADLNTRLKNPVDALQFRGNFELK
MDVDEPYAEDNWQWVRIGEDAVFRTVAPCTRCIFTNINAKTAERSSEGEP
LKTLRSYRLFNYSSPALGVHMGLRLPGKVKANDVVYVEDK*
BS24327.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:06:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1665-PA | 340 | CG1665-PA | 1..340 | 1..340 | 1784 | 100 | Plus |
