BS24338.complete Sequence
1664 bp assembled on 2011-02-15
GenBank Submission: KX805746
> BS24338.complete
GAAGTTATCAGTCGACATGACACAAAACCGGAGCACATGGATTGGATGCA
GCTTGGGCGGCCTGTTGGTCGCTCTATTGGCCCTGCAAACGATGCCACAG
GGCACTGAAGGAGCCAACATCCTGGGCGTCTTCACCAGCCACAGTCCGTC
GCATTTCATTGTGCACATGTCCATCATGAAGACGCTGGCGGAGAAGGGTC
ACAATGTGACCGTCGTCTCCTCCGTTCCACCTAAAGTCACCCACAAGAGC
ATTAACCACATTGTGGTGCCAATGAGTGCCGAAGATGAGAAAGTGCTCAA
CGATGGTATGGCTGGAATGGTGAAGGAGAAGCCTTCGATTTGGAATACGA
TGAAATCGATCTTCAGCTCGTTAGCCCTGCTCATTGATAAGCAGGTGGAC
GTTTTGGAGGATCCGCGCTTCCAGGAACTCTATCTGAACAAGGGCAACAA
ATTCGACGTGGTCTTCGTGGGATTCTTCTTCAACACGTACCAGGTGGCGT
TGGGTGCCCGGTTTAATTGCCCCGTTATAATATCCTGGTCGGGCCCACCC
ATGATGATGGTCAACGAGGTGCTGGGTAATCCCGAGCTATCCAGTGTTCC
CCAAATGCACATTTCCGCGCCTCCCGGTCAGCCTATGAATTTCCAGCAGC
GAATGCAGAACTTTGCCAGCACTTTGGGATTCAATGCTCTCAACATCTTC
CTGAATCACAAATACAACAAGTTCTATGACCGTCTTTGGAGCAAAGACAA
GTCAATGCCCACTTTTGCGCAGGCCAAGAGGAATGTCTCTTTGGCGTTTT
GCAATGGCCATGGCATCAGCGAAGGTCCCATTCGTCCGAATGTGCCTGGA
GTAATCGAAATTGGAGGCATCCAGGTGAAGAGCAAGCCCGATCCCCTGCC
AGAGGACATACAGGAGTTTCTGGAGAAGGGCAAGCACGGAGCCATTCTCT
TCAGTTTGGGTTCCAACTTAAAGGGCGAACATATCCAGCCCGAAGTGGTA
AAGACCATATTCAAGGGATTGAGCAGCCTTAAGCAGCAGGTGATCTGGAA
GTGGGAGGATCCCAAGAACACGCCCGGCAAGTCGGCTAATATACTCTACA
AGAAGTGGCTGCCCCAGGACGATATCCTGGCGCATCCCAAGCTCAAGCTG
TTCATCACGCATGCGGGCAAGGGAGGAGTGGCTGAGGCACAGTATCATGG
AGTGCCCATGCTGGCGCTACCCGTGTTTGCCGATCAGCCGGGTAATGCCG
ATAAGCTGGTGGCCAGTGGATATGGCCTGCAGCTGCCATTGGCCACCCTG
GATGTGGATGAATTCAAGGCAGCCATTAAGGAGGTCATCGAAAATCCCAA
GTACGCAAAGACATTGAAGAGCTTCTCACAGCTCTATCGCGATCGTCCTT
TGAGTCCTCAAGAATCGGTCGTCTACTGGACGGAGTATGTGATCCGTCAT
CATGGTGCCGCTCACATGCAGAGTCCCTTGGTGCACATGAATTTCATTGC
CAGCAATAATTTGGACATATATATCATCGCCGCCCTGGTGCTCTACATTG
TCTTCATCATCAACAAGATCGTGTGGAAATTTGTGTGGCGCAAGTTATTT
GGCAAATCGAACAAAGTTTCCAAGGGAAAGAAGGTGAAGAAGCAGTAGAA
GCTTTCTAGACCAT
BS24338.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 02:03:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ugt36Bc-RC | 1632 | CG17932-PC | 1..1632 | 17..1648 | 8160 | 100 | Plus |
| Ugt36Bc-RB | 1632 | CG17932-PB | 1..1632 | 17..1648 | 8160 | 100 | Plus |
| Ugt36Bc-RA | 1632 | CG17932-PA | 1..1632 | 17..1648 | 8160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:03:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ugt36Bc-RC | 1738 | CG17932-RC | 40..1672 | 16..1648 | 8165 | 100 | Plus |
| Ugt36Bc-RB | 1954 | CG17932-RB | 256..1888 | 16..1648 | 8165 | 100 | Plus |
| Ugt36Bc-RA | 1934 | CG17932-RA | 236..1868 | 16..1648 | 8165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 02:03:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16800600..16801518 | 730..1648 | 4595 | 100 | Plus |
| 2L | 23513712 | 2L | 16799807..16800520 | 16..729 | 3570 | 100 | Plus |
| 2L | 23513712 | 2L | 16797668..16797870 | 1046..1248 | 340 | 77.8 | Plus |
| 3R | 32079331 | 3R | 12742419..12742619 | 1239..1039 | 315 | 77.1 | Minus |
| 2L | 23513712 | 2L | 6226119..6226339 | 1032..1252 | 280 | 75.1 | Plus |
| 2L | 23513712 | 2L | 16795211..16795383 | 1043..1215 | 265 | 76.9 | Plus |
| 2L | 23513712 | 2L | 20372891..20373286 | 1212..817 | 225 | 70.5 | Minus |
| 3R | 32079331 | 3R | 12741102..12741212 | 1412..1522 | 225 | 80.2 | Plus |
| 2R | 25286936 | 2R | 16843847..16844043 | 1222..1026 | 220 | 74.1 | Minus |
| 2L | 23513712 | 2L | 20372581..20372691 | 1522..1412 | 210 | 79.3 | Minus |
| 3R | 32079331 | 3R | 12740729..12740938 | 1039..1248 | 210 | 73.3 | Plus |
| 3R | 32079331 | 3R | 12742148..12742246 | 1510..1412 | 195 | 79.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 02:03:29 has no hits.
BS24338.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-15 10:19:47 Download gff for
BS24338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt36Bc-RB | 253..1884 | 17..1648 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:08:23 Download gff for
BS24338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt36Bc-RA | 237..1868 | 17..1648 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:36:42 Download gff for
BS24338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt36Bc-RA | 237..1868 | 17..1648 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:36:42 Download gff for
BS24338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16799808..16800520 | 17..729 | 100 | -> | Plus |
| 2L | 16800600..16801518 | 730..1648 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:08:23 Download gff for
BS24338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16799808..16800520 | 17..729 | 100 | -> | Plus |
| arm_2L | 16800600..16801518 | 730..1648 | 100 | | Plus |
BS24338.pep Sequence
Translation from 16 to 1647
> BS24338.pep
MTQNRSTWIGCSLGGLLVALLALQTMPQGTEGANILGVFTSHSPSHFIVH
MSIMKTLAEKGHNVTVVSSVPPKVTHKSINHIVVPMSAEDEKVLNDGMAG
MVKEKPSIWNTMKSIFSSLALLIDKQVDVLEDPRFQELYLNKGNKFDVVF
VGFFFNTYQVALGARFNCPVIISWSGPPMMMVNEVLGNPELSSVPQMHIS
APPGQPMNFQQRMQNFASTLGFNALNIFLNHKYNKFYDRLWSKDKSMPTF
AQAKRNVSLAFCNGHGISEGPIRPNVPGVIEIGGIQVKSKPDPLPEDIQE
FLEKGKHGAILFSLGSNLKGEHIQPEVVKTIFKGLSSLKQQVIWKWEDPK
NTPGKSANILYKKWLPQDDILAHPKLKLFITHAGKGGVAEAQYHGVPMLA
LPVFADQPGNADKLVASGYGLQLPLATLDVDEFKAAIKEVIENPKYAKTL
KSFSQLYRDRPLSPQESVVYWTEYVIRHHGAAHMQSPLVHMNFIASNNLD
IYIIAALVLYIVFIINKIVWKFVWRKLFGKSNKVSKGKKVKKQ*
BS24338.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:12:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ugt36Bc-PC | 543 | CG17932-PC | 1..543 | 1..543 | 2848 | 100 | Plus |
| Ugt36Bc-PB | 543 | CG17932-PB | 1..543 | 1..543 | 2848 | 100 | Plus |
| Ugt36Bc-PA | 543 | CG17932-PA | 1..543 | 1..543 | 2848 | 100 | Plus |
| Ugt36Ba-PB | 523 | CG13270-PB | 3..521 | 15..539 | 1424 | 51.3 | Plus |
| Ugt36Ba-PA | 523 | CG13270-PA | 3..521 | 15..539 | 1424 | 51.3 | Plus |
