BS24347.complete Sequence
662 bp assembled on 2011-02-01
GenBank Submission: KX803643
> BS24347.complete
GAAGTTATCAGTCGACATGTTTCAGAAAAGGATTATCGAGCTGATCACGG
TGCTGGTGTATTGGGTGATCATCACGCCCACCACCTACAAGTACTGCACA
CAAAACGGAATAATTAGGATGAGCTTTGACACCCTGGTTGGCACTGTGGG
CGATCACTGCACCCTGGCCCTCTGCCTGATGATCGGATACGTTGTCTTCT
ACCGTATCATTATCTTCATTTACATGAAGTTGAAGGTCTGTGACATTCGG
ATGTGGGATGAACTGCAGCGAGCCAAAGAGGATCCGGAGGCGCATCTGGA
CAAAAAGTCCTACTACCAGCCCGTCTCCACCGAGAATATCGATGTCGTGG
ACTCTGGCAAGAAGAAGAACAAGCCAACGACTCCGAAGATGATAAGGACC
ATCAGCAATCCGCTGCTCATCGAAAGCGATCTGGCGCGCATTCACATCAA
GCACGAAACACGGCCTTTGGAAAGTGCCACCCTACCCAGACTGCAGCAGG
CAATGGTCCACCCTAGTCCGAGTCCCAGCTTGAGGAGCGCACCACCAGTG
CCCCAAATGCAGAAAAGTGCCACTCTACCGAATCAGCACAGCAAAGGTGT
GATTATGTCTCCCAAAGTTCTAATGCCCAGAACTCAACAGGTGTAGAAGC
TTTCTAGACCAT
BS24347.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:55:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13116-RB | 630 | CG13116-PB | 1..630 | 17..646 | 3150 | 100 | Plus |
| CG13116-RA | 630 | CG13116-PA | 1..630 | 17..646 | 3150 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:55:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13116-RB | 971 | CG13116-RB | 64..695 | 16..647 | 3160 | 100 | Plus |
| CG13116-RA | 1006 | CG13116-RA | 64..695 | 16..647 | 3160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:55:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9730003..9730634 | 16..647 | 3160 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 21:55:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-A | 13424 | TART-A 13424bp | 184..215 | 479..448 | 106 | 81.2 | Minus |
| TART-A | 13424 | TART-A 13424bp | 11362..11393 | 479..448 | 106 | 81.2 | Minus |
BS24347.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 16:02:06 Download gff for
BS24347.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13116-RA | 71..694 | 23..646 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:40:49 Download gff for
BS24347.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13116-RA | 71..694 | 23..646 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:45:54 Download gff for
BS24347.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13116-RA | 71..694 | 23..646 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:45:54 Download gff for
BS24347.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9730010..9730633 | 23..646 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:40:49 Download gff for
BS24347.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9730010..9730633 | 23..646 | 100 | | Plus |
BS24347.pep Sequence
Translation from 16 to 645
> BS24347.pep
MFQKRIIELITVLVYWVIITPTTYKYCTQNGIIRMSFDTLVGTVGDHCTL
ALCLMIGYVVFYRIIIFIYMKLKVCDIRMWDELQRAKEDPEAHLDKKSYY
QPVSTENIDVVDSGKKKNKPTTPKMIRTISNPLLIESDLARIHIKHETRP
LESATLPRLQQAMVHPSPSPSLRSAPPVPQMQKSATLPNQHSKGVIMSPK
VLMPRTQQV*
BS24347.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13116-PB | 209 | CG13116-PB | 1..209 | 1..209 | 1089 | 100 | Plus |
| CG13116-PA | 209 | CG13116-PA | 1..209 | 1..209 | 1089 | 100 | Plus |
