BS24351.complete Sequence
1433 bp assembled on 2011-02-01
GenBank Submission: KX802825
> BS24351.complete
GAAGTTATCAAAGGACATGGGCATCAATTGCCTTAACATCTTCAGACGTG
GCCTCCACACGAGTTCCGCCCGATTGCAGGTGATCCAGAGCACCACGCCC
ACCAAGCGGATATGCATCGTAGGCGCCGGACCCGCCGGCTTCTATGCCGC
CCAATTGATCCTCAAGCAGCTGGACAATTGCGTGGTGGATGTGGTCGAGA
AGCTGCCGGTTCCCTTCGGACTGGTGCGCTTTGGCGTTGCGCCCGATCAT
CCGGAGGTCAAGAACGTAATCAACACCTTCACCAAGACCGCCGAGCATCC
GCGTCTGCGTTACTTTGGCAACATATCGCTGGGTACGGATGTCAGCCTGC
GTGAGCTAAGAGATCGATACCATGCCGTGCTCCTCACCTACGGAGCGGAC
CAGGATCGGCAACTAGAGCTGGAGAACGAGCAGTTGGATAATGTGATATC
AGCCCGGAAATTTGTGGCCTGGTATAATGGATTGCCGGGTGCGGAAAACT
TGGCTCCGGATCTGAGCGGTCGCGATGTCACGATTGTGGGTCAGGGAAAC
GTGGCTGTGGATGTGGCTAGGATGCTGCTCAGTCCCTTGGATGCTTTGAA
GACTACGGACACAACTGAGTACGCCTTGGAAGCGCTTTCTTGCAGCCAAG
TGGAACGAGTCCATTTGGTTGGCCGACGAGGTCCTCTGCAAGCTGCCTTC
ACCATTAAGGAGCTGAGGGAGATGCTCAAGCTGCCCAATGTAGACACCCG
GTGGCGTACAGAGGATTTCTCGGGCATTGACATGCAGCTGGATAAACTTC
AGCGGCCTCGCAAGAGACTTACCGAACTGATGCTTAAGAGTCTAAAGGAG
CAGGGCAGGATCTCTGGCTCAAAACAATTCCTGCCCATCTTTCTGCGCGC
TCCGAAGGCGATAGCCCCAGGGGAAATGGAGTTTTCTGTCACGGAACTGC
AGCAGGAAGCAGCAGTGCCCACCAGTTCCACAGAGCGTCTTCCCTCGCAC
TTAATCCTGCGCAGCATTGGCTACAAATCTAGTTGCGTGGATACGGGCAT
CAACTTTGACACTCGACGCGGTCGCGTTCACAACATTAATGGTCGTATTC
TTAAGGATGATGCTACGGGAGAGGTTGACCCTGGACTTTATGTAGCTGGC
TGGCTAGGAACTGGGCCCACTGGCGTTATTGTGACCACCATGAACGGCGC
CTTTGCGGTAGCCAAGACCATCTGCGATGACATAAACACGAATGCTCTGG
ACACCAGTTCTGTCAAACCAGGATACGATGCGGATGGCAAACGAGTGGTT
ACTTGGGATGGCTGGCAGAGAATCAATGATTTCGAGAGCGCAGCGGGAAA
AGCCAAGGGAAAGCCGCGCGAGAAGATTGTTAGCATTGAGGAAATGTTAC
GGGTGGCTGGCGTCTGAAAGCTTTCTAGACCAT
BS24351.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:56:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dare-RA | 1401 | CG12390-PA | 1..1401 | 17..1417 | 7005 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:56:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dare-RA | 1681 | CG12390-RA | 158..1558 | 17..1417 | 7005 | 100 | Plus |
| CG30033-RC | 572 | CG30033-RC | 217..428 | 228..17 | 1060 | 100 | Minus |
| CG30033-RB | 1002 | CG30033-RB | 217..428 | 228..17 | 1060 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:56:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11291117..11291761 | 1417..773 | 3225 | 100 | Minus |
| 2R | 25286936 | 2R | 11292046..11292419 | 601..228 | 1870 | 100 | Minus |
| 2R | 25286936 | 2R | 11292806..11293017 | 228..17 | 1060 | 100 | Minus |
| 2R | 25286936 | 2R | 11291817..11291991 | 774..600 | 875 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:56:46 has no hits.
BS24351.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 16:02:10 Download gff for
BS24351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dare-RA | 155..1554 | 17..1416 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:41:41 Download gff for
BS24351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dare-RA | 158..1557 | 17..1416 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:46:34 Download gff for
BS24351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dare-RA | 158..1557 | 17..1416 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:46:34 Download gff for
BS24351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11291118..11291760 | 774..1416 | 100 | <- | Minus |
| 2R | 11291818..11291989 | 602..773 | 100 | <- | Minus |
| 2R | 11292046..11292418 | 229..601 | 100 | <- | Minus |
| 2R | 11292806..11293017 | 17..228 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:41:41 Download gff for
BS24351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7179323..7179494 | 602..773 | 100 | <- | Minus |
| arm_2R | 7178623..7179265 | 774..1416 | 100 | <- | Minus |
| arm_2R | 7179551..7179923 | 229..601 | 100 | <- | Minus |
| arm_2R | 7180311..7180522 | 17..228 | 100 | | Minus |
BS24351.pep Sequence
Translation from 16 to 1416
> BS24351.pep
MGINCLNIFRRGLHTSSARLQVIQSTTPTKRICIVGAGPAGFYAAQLILK
QLDNCVVDVVEKLPVPFGLVRFGVAPDHPEVKNVINTFTKTAEHPRLRYF
GNISLGTDVSLRELRDRYHAVLLTYGADQDRQLELENEQLDNVISARKFV
AWYNGLPGAENLAPDLSGRDVTIVGQGNVAVDVARMLLSPLDALKTTDTT
EYALEALSCSQVERVHLVGRRGPLQAAFTIKELREMLKLPNVDTRWRTED
FSGIDMQLDKLQRPRKRLTELMLKSLKEQGRISGSKQFLPIFLRAPKAIA
PGEMEFSVTELQQEAAVPTSSTERLPSHLILRSIGYKSSCVDTGINFDTR
RGRVHNINGRILKDDATGEVDPGLYVAGWLGTGPTGVIVTTMNGAFAVAK
TICDDINTNALDTSSVKPGYDADGKRVVTWDGWQRINDFESAAGKAKGKP
REKIVSIEEMLRVAGV*
BS24351.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dare-PA | 466 | CG12390-PA | 1..466 | 1..466 | 2394 | 100 | Plus |
