BS24361.complete Sequence
728 bp assembled on 2011-02-01
GenBank Submission: KX803340
> BS24361.complete
GAAGTTATCAGTCGACATGGAACGTTGGCATAACTGCGTAGCAGTGGTGA
CCGGAGCCAGTTCGGGAATCGGAGCGGCAATCACCCGAAAACTGATCTCC
GCTGGCGTCATGGTGGTTGCCCTGGCCCGTCGAATGGACCGCTTGGAGCA
ATTGCGTGAGGAGCTGCCGCAGGATCGGCGATCGCGATTGCGTATAATGC
AGTGCGATGTTTCGGATGTGTCATCCGTAAACGCGGTCTTTGACGCGGTG
CAGGGGGATCTGGGCAACGTGGACATTCTTATCAATAACGCCGGAAAGCT
GTCCGGTGGACAGCTGCTGACTATGTCGGTAGACACTGTGCAGCAGATGC
TGCAGACGAATGTAATGGGCGTGGTCTACTGCACCCAGCGCGCCTTTGAA
TCGATGCGGCAGCGCCAGTCCAAGGGTCATGTGGTGCTCATTAACAGCAT
TGTGGGTCACTACATCTTTAATCCCCTGCCTGGAAGTCAGCAGGAACTCA
ACATGTACCCGGCCACCAAGCACGCGATCACCGCTCTTACCGAGCTCTTT
CGCCAGGAGATGCGAGATTTCAAGACCAAAGTCAAGGTCACGGTGAGTAC
GTGTTTAATGAATGCACTACAAACTAATCAGGAAATTATTATTCACAATC
GAAGCTTTAAAGCCTCCCAAAATCTTGTTTTACTCAATAGAAACATAAGT
ACATATATGTAAAAGCTTTCTAGACCAT
BS24361.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:51:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG40485-RA | 696 | CG40485-PA | 1..696 | 17..712 | 3480 | 100 | Plus |
| CG40485-RB | 744 | CG40485-PB | 1..576 | 17..592 | 2880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:51:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG40485-RA | 1192 | CG40485-RA | 21..718 | 16..713 | 3490 | 100 | Plus |
| CG40485-RB | 1449 | CG40485-RB | 21..597 | 16..592 | 2885 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:51:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 22961643..22962340 | 713..16 | 3490 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:51:47 has no hits.
BS24361.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 16:01:57 Download gff for
BS24361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40485-RA | 22..715 | 17..710 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:39:09 Download gff for
BS24361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40485-RA | 22..715 | 17..710 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:44:23 Download gff for
BS24361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40485-RA | 22..715 | 17..710 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:44:23 Download gff for
BS24361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 22961646..22962339 | 17..710 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:39:09 Download gff for
BS24361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 22363482..22364175 | 17..710 | 100 | | Minus |
BS24361.pep Sequence
Translation from 16 to 711
> BS24361.pep
MERWHNCVAVVTGASSGIGAAITRKLISAGVMVVALARRMDRLEQLREEL
PQDRRSRLRIMQCDVSDVSSVNAVFDAVQGDLGNVDILINNAGKLSGGQL
LTMSVDTVQQMLQTNVMGVVYCTQRAFESMRQRQSKGHVVLINSIVGHYI
FNPLPGSQQELNMYPATKHAITALTELFRQEMRDFKTKVKVTVSTCLMNA
LQTNQEIIIHNRSFKASQNLVLLNRNISTYM*
BS24361.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG40485-PA | 231 | CG40485-PA | 1..231 | 1..231 | 1158 | 100 | Plus |
| CG40485-PB | 247 | CG40485-PB | 1..192 | 1..192 | 964 | 100 | Plus |
| CG40486-PC | 247 | CG40486-PC | 1..195 | 1..195 | 597 | 58.5 | Plus |
| CG40486-PB | 247 | CG40486-PB | 1..195 | 1..195 | 597 | 58.5 | Plus |
| antdh-PA | 250 | CG1386-PA | 1..192 | 1..192 | 531 | 53.6 | Plus |
