BS24364.complete Sequence
1493 bp assembled on 2011-02-02
GenBank Submission: KX802976
> BS24364.complete
GAAGTTATCAGTCGACATGCAGAGCCTACCACTACCAGGAGATGAAGCCA
TAGGCTTGCTACCCTCTCAGTCAGAAAGCTTTTCCATTTGGGTCAACGGC
GAGGAGCACTGGATATCCGGTGCGGACTCAAGCACCACCTGCGCAGATCT
AATATGCGCGTTAATCAGCTACCAAATAGACCAGAAACATGTGCTCAGCA
AGGAAGAAATACTCGCTCCACAGCAATTTGCTATTGTCCAAAAGCAGCGT
CACTACGAGGAGTATTTGGATAGTAGTGCCAGGCTCCTTGATGTTATAAC
CAGCCCTCACGCAATGCCGAAAGAGGAATACCAGCTACATCTTCGTCACT
TGGCCACTTCAAGTCGAAAGCAAGTCCCGACGACCGATAAGGACAGTGGA
ATGGGCAGTCCAGTAGATAGTTCGCGGAGCATGCGCATCCGGCGGAGGGG
CAAGCTTCTCTCCACTAAGACCACAGACAATATCAACACTAAGCAGTCGA
AGAGAAGCCGGAAGCAGCAGCAGAGGAACCACCACTTAACTCCGAACGAG
AGCCTGCTTACCATTATCCTTGCCCAAGATGAAACCATTCTGCAGCAAAT
GACCATGTTGCACGAAAAGGATCGACAGATTTTTAAAATCGAGGAGGAGA
AGCACCAGGTGAGGGAGCGAGAGCTGGGTAAAAACTACCTCCTTGAGACG
TACTTAAAGGACTTGGATGAGCCCCAAGAAAAGGGCGAAGACCTGGAACT
GTTTGAAGAAATGACACACATAGACGTAGATCGAGACTTTGGTATAATGT
CAGATAGTACCGTCCAAACTGCGTTAAATAGTGGCACTATGCAGGACGAC
ATCCGGCTTTACTGGCTGGAAAAGATTCACGAGGTAAACAAAGAGCTGCA
ATGTGAAGAGGAACTTTTACTCAGCCTGCACTCCAAGGTACGTAGACACC
AGGTGAAGCGGGCGTACCAAACGAAGAGCGAGGTGCTACTACAAATCGAA
AGACTCGATACAGAGTTGGCTACTCAGGTGGCGGATATCCACCATGTGGA
ACGAAAACTTTTCACGGCCAATGAACAGCTTAAAGCCAAACTGGCTGTTC
TTGAATGTTTGAGTCGTGAATTTGAGACTACAGTATCTGGAGGCGTTCAA
GAAGGTGATGTTGCCACTGGCAGCAATGCAAGTGCAAAGGTTCAGCAAAG
CCAATCAGATGATCTCCAACACGCTGGGAACTGGCTGCACGTTGTTAAGA
GACTCTTTGCGGCAGATCATCTTAATCGGCGATTAACGCAACAGGCACTA
AGTGAAAAGAACTTAACGGATCGACTAATACCCAGCAAAGGAATATCCAA
GCAGATGTTCGAAGTTCTAAGATCCCCAGATCCTTCTACCTCGAACAGCG
TAAACAAAAAAGAGTTGAGTACTAGGCAAGCAATTTCTTTAGAAAGGGAT
ATTCAACACCTCGGCACCCTTGTTTAAAAGCTTTCTAGACCAT
BS24364.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:54:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13875-RB | 1461 | CG13875-PB | 1..1461 | 17..1477 | 7305 | 100 | Plus |
| CG13875-RA | 1461 | CG13875-PA | 1..1461 | 17..1477 | 7305 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13875-RB | 1686 | CG13875-RB | 107..1567 | 17..1477 | 7305 | 100 | Plus |
| CG13875-RA | 1975 | CG13875-RA | 396..1856 | 17..1477 | 7305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 181741..182416 | 802..1477 | 3380 | 100 | Plus |
| 3L | 28110227 | 3L | 180777..181088 | 17..328 | 1560 | 100 | Plus |
| 3L | 28110227 | 3L | 181148..181431 | 329..612 | 1420 | 100 | Plus |
| 3L | 28110227 | 3L | 181490..181680 | 613..803 | 955 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:54:22 has no hits.
BS24364.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:13 Download gff for
BS24364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13875-RA | 394..1852 | 17..1475 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:38:04 Download gff for
BS24364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13875-RA | 396..1854 | 17..1475 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:13:11 Download gff for
BS24364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13875-RA | 396..1854 | 17..1475 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:13:11 Download gff for
BS24364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 180777..181088 | 17..328 | 100 | -> | Plus |
| 3L | 181148..181431 | 329..612 | 100 | -> | Plus |
| 3L | 181490..181680 | 613..803 | 100 | -> | Plus |
| 3L | 181743..182414 | 804..1475 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:38:04 Download gff for
BS24364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 180777..181088 | 17..328 | 100 | -> | Plus |
| arm_3L | 181148..181431 | 329..612 | 100 | -> | Plus |
| arm_3L | 181490..181680 | 613..803 | 100 | -> | Plus |
| arm_3L | 181743..182414 | 804..1475 | 100 | | Plus |
BS24364.pep Sequence
Translation from 16 to 1476
> BS24364.pep
MQSLPLPGDEAIGLLPSQSESFSIWVNGEEHWISGADSSTTCADLICALI
SYQIDQKHVLSKEEILAPQQFAIVQKQRHYEEYLDSSARLLDVITSPHAM
PKEEYQLHLRHLATSSRKQVPTTDKDSGMGSPVDSSRSMRIRRRGKLLST
KTTDNINTKQSKRSRKQQQRNHHLTPNESLLTIILAQDETILQQMTMLHE
KDRQIFKIEEEKHQVRERELGKNYLLETYLKDLDEPQEKGEDLELFEEMT
HIDVDRDFGIMSDSTVQTALNSGTMQDDIRLYWLEKIHEVNKELQCEEEL
LLSLHSKVRRHQVKRAYQTKSEVLLQIERLDTELATQVADIHHVERKLFT
ANEQLKAKLAVLECLSREFETTVSGGVQEGDVATGSNASAKVQQSQSDDL
QHAGNWLHVVKRLFAADHLNRRLTQQALSEKNLTDRLIPSKGISKQMFEV
LRSPDPSTSNSVNKKELSTRQAISLERDIQHLGTLV*
BS24364.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:06:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13875-PB | 486 | CG13875-PB | 1..486 | 1..486 | 2464 | 100 | Plus |
| CG13875-PA | 486 | CG13875-PA | 1..486 | 1..486 | 2464 | 100 | Plus |
