BS24367.complete Sequence
959 bp assembled on 2011-02-02
GenBank Submission: KX804626
> BS24367.complete
GAAGTTATCAGTCGACATGCTTACCGACAGAGTTCTGGCCACCAAGGAGG
CGCTAGTGGTGGCTCTGGGCGACAACTGGGAGCGTTACCGGGCCAACATG
AAGAATTGGTTTCGGAGCCGTTGGACTAAGGAGGAATTCGATGCGGAGTC
GCGGAAAATCCTAACACCTGACAAACTGCACCTGCACAATCAGTTCCTGC
TCGCCCTGCTCAACAAGATCGACGCCTTTGCTCCCCTGGAGAATCCTCCG
GCCGTCCAGACCAGCAGCAGTAGTGGCAACCGAAGCAAACGGCGCAAAAG
AAGTTGCCGCACCTTCGCCGAACGCCTTAATTTTGAGCTCAGCGACGTCC
TGGACTTTGTAGCCGAGGACAACATGCAAATCATTCGTCCGCCAACCACG
ATCGGTATTCCGTCGGACCAGCAACAGCAACAGCTTCAGTCGCAGCGGTA
CTGCGCGCAGGAACTTTTCCTGCCCGACGCGGGATTCATTATGGGACGAT
TTCTGATCGGTGCCTGGGAAATCGGACTTGTCTCCGTGGACGACAATGTC
GCCGAGTACGTTGCCATGGCCGTGCAAGTTCTGCTCAAGGATCTACTATC
GGCAATCATCAAGAAACGAAAGCACTACAAGACCAGCGGCGAAGGAAACT
TTTACTACGATGTAGGTGCTCCGTTGCGTGATCCTTCGCTGCGCAACACC
GTCACCCGGCAGAAGGTCGACGACACGCCGCTGGAACTGGACAAGGAACT
GAATACGGCCAACTTTATGCGGCGACAGAACGACGATGTGACCTTCCTCT
CCGCCTGCGAAGAAGTCCAACCCACCGAACGCACAGTAATCACCCTCAAG
GACTGCCAACTGGCCTTACGGGATCGCAACCTGATAGGCTCGCATGCCGT
CTACTCCATAAACATGGAACGACTCAATATGATGATGCATTAGAAGCTTT
CTAGACCAT
BS24367.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:52:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ada1-1-RB | 927 | CG31865-PB | 1..927 | 17..943 | 4620 | 99.9 | Plus |
| Ada1-1-RA | 927 | CG31865-PA | 1..927 | 17..943 | 4620 | 99.9 | Plus |
| Ada1-2-RA | 927 | CG31866-PA | 1..927 | 17..943 | 4590 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ada1-1-RB | 1068 | CG31865-RB | 71..997 | 17..943 | 4620 | 99.9 | Plus |
| Ada1-1-RA | 1093 | CG31865-RA | 96..1022 | 17..943 | 4620 | 99.9 | Plus |
| Ada1-2-RA | 1089 | CG31866-RA | 92..1018 | 17..943 | 4590 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11996904..11997703 | 17..816 | 3985 | 99.9 | Plus |
| 2L | 23513712 | 2L | 11992993..11993792 | 17..816 | 3970 | 99.8 | Plus |
| 2L | 23513712 | 2L | 11997768..11997894 | 817..943 | 635 | 100 | Plus |
| 2L | 23513712 | 2L | 11993857..11993983 | 817..943 | 620 | 99.2 | Plus |
Blast to na_te.dros performed 2014-11-27 00:52:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| accord | 7404 | accord ACCORD 7404bp | 6601..6633 | 154..186 | 111 | 81.8 | Plus |
BS24367.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:09 Download gff for
BS24367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ada1-1-RA | 94..1020 | 17..943 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:36:52 Download gff for
BS24367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ada1-1-RA | 94..1020 | 17..943 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:12:02 Download gff for
BS24367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ada1-1-RA | 96..1022 | 17..943 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:12:02 Download gff for
BS24367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11996904..11997703 | 17..816 | 99 | -> | Plus |
| 2L | 11997768..11997894 | 817..943 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:36:52 Download gff for
BS24367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11996904..11997703 | 17..816 | 99 | -> | Plus |
| arm_2L | 11997768..11997894 | 817..943 | 100 | | Plus |
BS24367.pep Sequence
Translation from 16 to 942
> BS24367.pep
MLTDRVLATKEALVVALGDNWERYRANMKNWFRSRWTKEEFDAESRKILT
PDKLHLHNQFLLALLNKIDAFAPLENPPAVQTSSSSGNRSKRRKRSCRTF
AERLNFELSDVLDFVAEDNMQIIRPPTTIGIPSDQQQQQLQSQRYCAQEL
FLPDAGFIMGRFLIGAWEIGLVSVDDNVAEYVAMAVQVLLKDLLSAIIKK
RKHYKTSGEGNFYYDVGAPLRDPSLRNTVTRQKVDDTPLELDKELNTANF
MRRQNDDVTFLSACEEVQPTERTVITLKDCQLALRDRNLIGSHAVYSINM
ERLNMMMH*
BS24367.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:05:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ada1-1-PB | 308 | CG31865-PB | 1..308 | 1..308 | 1588 | 100 | Plus |
| Ada1-1-PA | 308 | CG31865-PA | 1..308 | 1..308 | 1588 | 100 | Plus |
| Ada1-2-PA | 308 | CG31866-PA | 1..308 | 1..308 | 1578 | 99.7 | Plus |
