Clone BS24372 Report

Search the DGRC for BS24372

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:243
Well:72
Vector:pDNR-Dual
Associated Gene/TranscriptCG4788-RA
Protein status:BS24372.pep: full length peptide match
Sequenced Size:791

Clone Sequence Records

BS24372.complete Sequence

791 bp assembled on 2011-02-01

GenBank Submission: KX801081

> BS24372.complete
GAAGTTATCAGTCGACATGCAGCAAACAAATCCGGCTTCTGGCGGGGATG
CGCTGCTTCCATTGCGCACCTGCAACACCACCGGATGCAAAGTGGCCACT
GTGGTGGAGAAGACGAAGAGGAAGTGCTCCCAGTTCGTGTCCGCGCCGTA
CATAATGCCCAAGCCACTGGTAGTCAATGGGCACACATCGATCTTTCAAG
TGGGCGGCGAAATGGCCCATATGGGCGACATTCCGGCGCTCTCGAAAATT
AGTGATGGTGGACAGCTAGTATACCGAATAAAGCCGGGCACCCATGCCCA
TGTCATCAACTATGTGATCATCGACGAGGGCTCCGACTCGCTGGAGAAGG
CCAGATCCGGCGACCAGGAGGCCATGCGTCTGCTGCTGGAATCGCAACGT
GACAGTGCTGCGTCCAAGCTACAAAAGTTTTTAACCAACCATAAGGGAAC
TCCGCCATCGGGCTATATTTCATCGCTAATACTATCACGGCCAGTGGCCA
GCGTCTCAACGTCTGCGGGCACTCCAGCGGCCACTGGCCATGTGACTACT
CCTCAAATCCATCCGAACTTCTCCATCGCCAGCGTAGAGGGTGCAGTACC
ATTTAGACGCGCCGTTCCACCCTTGGCGGTGAATCCTTCAGCTCCAGCTC
CAGTTCCTTCAGGCCCTCTCCCAGCTGTCAGTGCAGTTCAAGCTGACTCC
GTGGATCGCCTTCAGGCGGAGCTTGTCGAGTTGCGACGTACGGTGGCGCG
CTTGGAGGAGAATAGTCGCCGCTAGAAGCTTTCTAGACCAT

BS24372.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:51:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG4788-RB 759 CG4788-PB 1..759 17..775 3795 100 Plus
CG4788-RA 759 CG4788-PA 1..759 17..775 3795 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:51:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG4788-RB 1200 CG4788-RB 201..960 17..776 3800 100 Plus
CG4788-RA 1399 CG4788-RA 201..960 17..776 3800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:51:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11179232..11179991 17..776 3800 100 Plus
Blast to na_te.dros performed on 2014-11-26 21:51:34 has no hits.

BS24372.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 16:01:56 Download gff for BS24372.complete
Subject Subject Range Query Range Percent Splice Strand
CG4788-RA 192..950 17..775 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:39:01 Download gff for BS24372.complete
Subject Subject Range Query Range Percent Splice Strand
CG4788-RA 201..959 17..775 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:44:18 Download gff for BS24372.complete
Subject Subject Range Query Range Percent Splice Strand
CG4788-RA 201..959 17..775 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:44:18 Download gff for BS24372.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11179232..11179990 17..775 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:39:01 Download gff for BS24372.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11179232..11179990 17..775 100   Plus

BS24372.pep Sequence

Translation from 16 to 774

> BS24372.pep
MQQTNPASGGDALLPLRTCNTTGCKVATVVEKTKRKCSQFVSAPYIMPKP
LVVNGHTSIFQVGGEMAHMGDIPALSKISDGGQLVYRIKPGTHAHVINYV
IIDEGSDSLEKARSGDQEAMRLLLESQRDSAASKLQKFLTNHKGTPPSGY
ISSLILSRPVASVSTSAGTPAATGHVTTPQIHPNFSIASVEGAVPFRRAV
PPLAVNPSAPAPVPSGPLPAVSAVQADSVDRLQAELVELRRTVARLEENS
RR*

BS24372.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG4788-PB 252 CG4788-PB 1..252 1..252 1278 100 Plus
CG4788-PA 252 CG4788-PA 1..252 1..252 1278 100 Plus