BS24377.complete Sequence
893 bp assembled on 2011-02-02
GenBank Submission: KX804177
> BS24377.complete
GAAGTTATCAGTCGACATGAAGTACCTCAAAGACTGCAGTTTCCATGTCC
TGTTGGTTCTGCTGCTAATGATCCGTGGATCGCTTTGTGTGCCAGCTTTG
GACGCAGCTCCTCCGGCTGCCACACCCAACACCGTGGAAGAGTCGGAAAA
TCTGGTCGAGGGCAGTGGCGAACCAGTTGTCGCACCCACAGACGTGGTAC
CTGCAGCCAGCAATGGTACCACTCCTCCGGCTGAAGGAAACTCGGAAGCA
GCGGTGCCAGACAACGTGGCCAGTGGTAGCAGCATTGATCCCACCACCAT
TTACGCTGGAGGCCTACTCACTCCCGAGGCCTTTCAGCAGTACCTGAGTC
AGTATGGAGCGTATGCTCCTTACTCCTATCCTGCTCCTGTTGCGGGAACA
GCAGCTGGCATTTACCCGTACCCTGGACCCATTGTGGTGCAGACGGGCTA
CGAGGGATTCCTGGTGCCCACTAATACCGCAGGACAATCGGACAGCACCA
CTGTCCTGGCTCCCACTGCCCAGCCCAACTCCTCGAATCCACTGATGACA
TTTGTCTCCAATCTTCTGCCCACGATCCTGATGTCCACGCTCTTTCGCAT
CGCTGCCGTTGTGGTTTCCGCCGTGGGCATCATCCTCTTTGGCGGTGCCA
TCACCAGTGCCCTGTGCAGGATCACTCCAATCTGTGAAATACCCGCCCGT
GCTGTGAATATCCTGCGGACGGGTGGTGCCCAGGATGTGGGTCGCATGCT
GGCCGAGGAGATGACTCCGGAACGAGTGCGTCGGGCAACGGAATTCGTGC
GCAACGCCATCCGGAAGTACAAGCAACTGCAGAAGCTGGTGGAGGCATCG
GAGGCGGTGACCGAGTTGACCAACTAGAAGCTTTCTAGACCAT
BS24377.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:51:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10035-RB | 861 | CG10035-PB | 1..861 | 17..877 | 4305 | 100 | Plus |
| CG10035-RA | 861 | CG10035-PA | 1..861 | 17..877 | 4305 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10035-RB | 1754 | CG10035-RB | 32..892 | 17..877 | 4305 | 100 | Plus |
| CG10035-RA | 972 | CG10035-RA | 32..892 | 17..877 | 4305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12381731..12382352 | 877..256 | 3110 | 100 | Minus |
| 3R | 32079331 | 3R | 12382421..12382660 | 256..17 | 1200 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 00:51:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 8121..8200 | 883..805 | 118 | 62.5 | Minus |
| TART-C | 11124 | TART-C TARTC 11124bp | 9565..9644 | 883..805 | 118 | 62.5 | Minus |
BS24377.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:06 Download gff for
BS24377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10035-RA | 31..891 | 17..877 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:36:29 Download gff for
BS24377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10035-RA | 31..891 | 17..877 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:11:46 Download gff for
BS24377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10035-RA | 32..892 | 17..877 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:11:46 Download gff for
BS24377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12381731..12382351 | 257..877 | 100 | <- | Minus |
| 3R | 12382421..12382660 | 17..256 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:36:29 Download gff for
BS24377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8207453..8208073 | 257..877 | 100 | <- | Minus |
| arm_3R | 8208143..8208382 | 17..256 | 100 | | Minus |
BS24377.pep Sequence
Translation from 16 to 876
> BS24377.pep
MKYLKDCSFHVLLVLLLMIRGSLCVPALDAAPPAATPNTVEESENLVEGS
GEPVVAPTDVVPAASNGTTPPAEGNSEAAVPDNVASGSSIDPTTIYAGGL
LTPEAFQQYLSQYGAYAPYSYPAPVAGTAAGIYPYPGPIVVQTGYEGFLV
PTNTAGQSDSTTVLAPTAQPNSSNPLMTFVSNLLPTILMSTLFRIAAVVV
SAVGIILFGGAITSALCRITPICEIPARAVNILRTGGAQDVGRMLAEEMT
PERVRRATEFVRNAIRKYKQLQKLVEASEAVTELTN*
BS24377.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:05:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10035-PB | 286 | CG10035-PB | 1..286 | 1..286 | 1446 | 100 | Plus |
| CG10035-PA | 286 | CG10035-PA | 1..286 | 1..286 | 1446 | 100 | Plus |
