BS24378.complete Sequence
1703 bp assembled on 2011-02-02
GenBank Submission: KX801301
> BS24378.complete
GAAGTTATCAGTCGACATGGGAAACTCCTCGTCACACACGCACGAACCAC
TCGAGCGCGGCTTCACACGCGGAAAATTCGGTGATGTTAAAAATGGGAAA
TCCGCTTCCTTCCGGTTTAGCAAGAAATCGCCGAAGAAAATGGATCGTCT
GCGTCGCTCCTTTCGCGATTCCTTTAGGCGTCGCAAGGATCGCGTTCCCG
AATCCTCGAAGCCGCATCAATGGCAGGCGGACGAGGAGGCCGTGCGATCG
GCCACCTGCTCCTTTTCCGTCAAGTATCTGGGATGTGTCGAGGTCTTTGA
ATCGCGCGGCATGCAGGTCTGCGAGGAGGCACTCAAGGTCTTGAGGCAAT
CCCGTCGTCGTCCTGTCCGCGGATTACTTCATGTCAGCGGAGACGGCCTG
CGAGTGGTGGACGACGAGACCAAGGGCCTGATAGTGGACCAGACCATCGA
GAAGGTCAGCTTCTGTGCACCGGATCGCAATCACGAACGCGGCTTCAGCT
ACATATGCCGGGATGGAACCACTCGTCGCTGGATGTGTCACGGCTTCCTG
GCGTGCAAGGACTCCGGCGAGCGATTGTCCCATGCCGTTGGCTGTGCTTT
TGCCGTTTGTCTGGAGCGAAAGCAGCGACGCGACAAGGAGTGCGGCGTGA
CAATGACCTTCGACACGAAGAACTCGACCTTCACGCGGACCGGATCCTTC
CGTCAGCAGACGTTGACGGAGCGTCTGGCAATGGCCACAGTGGGCACAAA
TGAGCGGAGCGTAGATGGGCCGGGATCAGCAATGCCGGGTCCTCCGGCGG
CCACCGTCAAGCCTTTCAATCCCTTCGCCATCGAACGGCCCCATGCCACG
CCCAACATGCTGGAGCGTCAGAGTTCGTTCCGTTTGAGCACGATTGGCAG
TCAGTCGCCGTTCAAGCGCCAGATGTCACTGCGCATCAACGATCTTCCGT
CCAATGCCGATCGTCAGAGGGCCTTCCTGACCGCCGCCGCTGGCAATCCA
ATGCAGACGCCACTGCGAAGTGTTTCTCCCATTGCCGAGGTCTCGCCGGC
CAAGTCTGCTGGAGCGGATCCGTTGTCAGCTGCCGCTGTAGCCGCCGATT
CTGTGAGCCAACTGTGTCAGGAGCTCAGCCAGGGTCTCTCGCTCTTGACC
CAGACAGACGCCCTATTAGCCGCCGGCGAGGATCTAAACTTCAACAACAA
TCGCAGCATTAATCAGAACATCATTGCCGCCGAGAAGCAGGTGCAACATG
TACACTCATATGCCCCGCCGACGGCACAAGTGACGCCTCGAGTGGCCAGC
ACCACGCCCACATATCAGACGCTCCATTCGCAGTCGCCCTCGCGATCGGA
GCAGAGCATCGAAACCTCGACGGAACTGCCCAATGCCGAGCAATGGCTGG
GTCATGTGGTGCGCAGTACGTCTCCGGCAGCACCGAAGCGGCCCACTTAT
TTGGCCAACGTTGGCCGAGCTCAGACACTGGCCAGTGGCACTGGCGCTGC
AGTTGGAGGCGGTGGCCCAGACGATCCATTTGACGCCGAGTGGGTGGCCA
ATGTGGCAGCGGCCAAGCAATTGTCGCCAGACTTGCCAATCCCGAGCACT
GCGCGCTCGCCTCTGGCCAGGCACAGCACCAATCCGTTCATCTCACCGCC
CAAGGCGCCGGCGCAGTCATTCCAGGTGCAGCTCTAGAAGCTTTCTAGAC
CAT
BS24378.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:51:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-RD | 1671 | CG3779-PD | 1..1671 | 17..1687 | 8355 | 100 | Plus |
| numb-RA | 1671 | CG3779-PA | 1..1671 | 17..1687 | 8355 | 100 | Plus |
| numb-RB | 1548 | CG3779-PB | 1..1548 | 140..1687 | 7740 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-RD | 4395 | CG3779-RD | 818..2489 | 16..1687 | 8360 | 100 | Plus |
| numb-RA | 3309 | CG3779-RA | 793..2464 | 16..1687 | 8360 | 100 | Plus |
| numb-RB | 2956 | CG3779-RB | 521..2111 | 97..1687 | 7955 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9460937..9462278 | 346..1687 | 6710 | 100 | Plus |
| 2L | 23513712 | 2L | 9460504..9460753 | 97..346 | 1250 | 100 | Plus |
| 2L | 23513712 | 2L | 9460287..9460368 | 16..97 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:51:19 has no hits.
BS24378.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:06 Download gff for
BS24378.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 794..2464 | 17..1687 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:36:20 Download gff for
BS24378.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 794..2464 | 17..1687 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:11:37 Download gff for
BS24378.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 794..2464 | 17..1687 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:11:37 Download gff for
BS24378.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9460288..9460368 | 17..97 | 100 | -> | Plus |
| 2L | 9460505..9460753 | 98..346 | 100 | -> | Plus |
| 2L | 9460938..9462278 | 347..1687 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:36:20 Download gff for
BS24378.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9460288..9460368 | 17..97 | 100 | -> | Plus |
| arm_2L | 9460505..9460753 | 98..346 | 100 | -> | Plus |
| arm_2L | 9460938..9462278 | 347..1687 | 100 | | Plus |
BS24378.pep Sequence
Translation from 16 to 1686
> BS24378.pep
MGNSSSHTHEPLERGFTRGKFGDVKNGKSASFRFSKKSPKKMDRLRRSFR
DSFRRRKDRVPESSKPHQWQADEEAVRSATCSFSVKYLGCVEVFESRGMQ
VCEEALKVLRQSRRRPVRGLLHVSGDGLRVVDDETKGLIVDQTIEKVSFC
APDRNHERGFSYICRDGTTRRWMCHGFLACKDSGERLSHAVGCAFAVCLE
RKQRRDKECGVTMTFDTKNSTFTRTGSFRQQTLTERLAMATVGTNERSVD
GPGSAMPGPPAATVKPFNPFAIERPHATPNMLERQSSFRLSTIGSQSPFK
RQMSLRINDLPSNADRQRAFLTAAAGNPMQTPLRSVSPIAEVSPAKSAGA
DPLSAAAVAADSVSQLCQELSQGLSLLTQTDALLAAGEDLNFNNNRSINQ
NIIAAEKQVQHVHSYAPPTAQVTPRVASTTPTYQTLHSQSPSRSEQSIET
STELPNAEQWLGHVVRSTSPAAPKRPTYLANVGRAQTLASGTGAAVGGGG
PDDPFDAEWVANVAAAKQLSPDLPIPSTARSPLARHSTNPFISPPKAPAQ
SFQVQL*
BS24378.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:05:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-PD | 556 | CG3779-PD | 1..556 | 1..556 | 2880 | 100 | Plus |
| numb-PA | 556 | CG3779-PA | 1..556 | 1..556 | 2880 | 100 | Plus |
| numb-PB | 515 | CG3779-PB | 1..515 | 42..556 | 2663 | 100 | Plus |
