BS24379.complete Sequence
500 bp assembled on 2011-02-01
GenBank Submission: KX802730
> BS24379.complete
GAAGTTATCAGTCGACATGTCTGTGCCTTTCAGTGGCGCATTGCGGCGTT
CCGGCGGCATTGTGTCCGCCATTGGCAAGCAGCTGAAGAGCGTGAATTTG
AAGGGCGTCAAGCGGATAACCGTGCAGTTCGATCCATTCGCGGAAAATGT
CAAGTCCACACGGGAATTCCTCTTCCTGCTCTCCACACCCAAAGTGGCAG
CTACGAATCCCAAGTGCGTGGTCAAGCCAGAAATCGTCTGCGATCGCCAG
CCGGCCAACATCAAGTTTGCCCTGATTGATTCAGCGCAAGAACAAGCCCA
AGTCAAGGAGATCCGCTTCAACAGCGATAACCTAAACACACTAGAGCTGC
TGCAGCTGTGCAACAAGCACGTGTCCAGCTTGGCACCGCGCGAGGAGATC
ACCAACAAGGTCCTGACCAAGGCGGAGAAACAGAAACTAGCAGGAGGCGC
CGGCGGCGGAAAGAAGGCAACCAAGAAGAAGTAAAAGCTTTCTAGACCAT
BS24379.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:53:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL53-RA | 468 | CG30481-PA | 1..468 | 17..484 | 2340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:53:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33155-RC | 829 | CG33155-RC | 106..573 | 17..484 | 2340 | 100 | Plus |
| mRpL53-RA | 829 | CG30481-RA | 106..573 | 17..484 | 2340 | 100 | Plus |
| CG33155-RA | 725 | CG33155-RA | 147..469 | 162..484 | 1615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:53:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13955213..13955408 | 289..484 | 980 | 100 | Plus |
| 2R | 25286936 | 2R | 13954300..13954446 | 17..163 | 735 | 100 | Plus |
| 2R | 25286936 | 2R | 13954916..13955044 | 162..290 | 645 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:53:38 has no hits.
BS24379.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 16:02:03 Download gff for
BS24379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33155-RC | 102..567 | 17..482 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:40:04 Download gff for
BS24379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL53-RA | 106..571 | 17..482 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:45:15 Download gff for
BS24379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL53-RA | 106..571 | 17..482 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:45:15 Download gff for
BS24379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13954300..13954445 | 17..162 | 100 | -> | Plus |
| 2R | 13954917..13955044 | 163..290 | 100 | -> | Plus |
| 2R | 13955215..13955406 | 291..482 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:40:04 Download gff for
BS24379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9841805..9841950 | 17..162 | 100 | -> | Plus |
| arm_2R | 9842422..9842549 | 163..290 | 100 | -> | Plus |
| arm_2R | 9842720..9842911 | 291..482 | 100 | | Plus |
BS24379.pep Sequence
Translation from 16 to 483
> BS24379.pep
MSVPFSGALRRSGGIVSAIGKQLKSVNLKGVKRITVQFDPFAENVKSTRE
FLFLLSTPKVAATNPKCVVKPEIVCDRQPANIKFALIDSAQEQAQVKEIR
FNSDNLNTLELLQLCNKHVSSLAPREEITNKVLTKAEKQKLAGGAGGGKK
ATKKK*
BS24379.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL53-PA | 155 | CG30481-PA | 1..155 | 1..155 | 773 | 100 | Plus |
