BS24389.complete Sequence
629 bp assembled on 2011-02-01
GenBank Submission: KX803343
> BS24389.complete
GAAGTTATCAGTCGACATGGCCGAGGCTAACAAGAGGAATATCCCCATCA
AGCTGGGCGACTTCAGCGTCATCGACACGGAGTTCAGCAACATCCGCGAG
CGCTTCGACTCCGAGATGCGCAAAATGGAGGAGGAGATGGCCAAGTTCCG
TCACGAGCTGATGAACCGCGAGGCGAACTTCTTCGAGTCCACCAGCTCTA
CTAAAAAAACAACAACTACCAGCTCAACGACAAACTCGGCGCTGCCATCC
CGAATCCCAAAGCAACAGAACTACGTCTCCGACATTAGCTCACCCTTGAT
CCAGGATGAGGGCGATAACAAAGTGCTGAAGCTGCGTTTCGATGTCAGCC
AGTATGCGCCCGAGGAAATTGTTGTGAAAACCGTCGACCAGAAGCTATTG
GTGCACGCCAAGCACGAGGAGAAGTCGGACACAAAGAGCGTGTACAGGGA
GTACAATCGGGAGTTCCTGCTGCCCAAGGGCGTCAATCCCGAGTCCATCC
GCTCGTCCCTCAGCAAGGACGGAGTCCTGACCGTGGACGCCCCCCTGCCA
GCACTCACCGCCGGCGAGACACTGATTCCCATTGCGCACAAGTGAAAGCT
TTCTAGACCATTCGTTTGGCCCCCAAGGG
BS24389.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:52:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14207-RB | 579 | CG14207-PB | 1..579 | 17..595 | 2895 | 100 | Plus |
| CG14207-RD | 552 | CG14207-PD | 175..552 | 218..595 | 1890 | 100 | Plus |
| CG14207-RC | 465 | CG14207-PC | 88..465 | 218..595 | 1890 | 100 | Plus |
| CG14207-RD | 552 | CG14207-PD | 1..182 | 17..198 | 910 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:52:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14207-RB | 1267 | CG14207-RB | 306..885 | 17..596 | 2900 | 100 | Plus |
| CG14207-RD | 1380 | CG14207-RD | 480..858 | 218..596 | 1895 | 100 | Plus |
| CG14207-RC | 753 | CG14207-RC | 113..491 | 218..596 | 1895 | 100 | Plus |
| CG14207-RD | 1380 | CG14207-RD | 306..487 | 17..198 | 910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:52:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19610695..19610891 | 400..596 | 985 | 100 | Plus |
| X | 23542271 | X | 19605504..19605682 | 17..195 | 895 | 100 | Plus |
| X | 23542271 | X | 19610525..19610625 | 302..402 | 505 | 100 | Plus |
| X | 23542271 | X | 19610378..19610463 | 220..305 | 430 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:52:07 has no hits.
BS24389.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 16:01:58 Download gff for
BS24389.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HspB8-RB | 347..929 | 17..599 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:39:19 Download gff for
BS24389.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14207-RB | 306..888 | 17..599 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:44:33 Download gff for
BS24389.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14207-RB | 306..888 | 17..599 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:44:33 Download gff for
BS24389.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19605504..19605682 | 17..195 | 100 | -> | Plus |
| X | 19609463..19609489 | 196..222 | 100 | -> | Plus |
| X | 19610381..19610462 | 223..304 | 100 | -> | Plus |
| X | 19610528..19610623 | 305..400 | 100 | -> | Plus |
| X | 19610696..19610894 | 401..599 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:39:19 Download gff for
BS24389.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19504561..19504656 | 305..400 | 100 | -> | Plus |
| arm_X | 19504729..19504927 | 401..599 | 99 | | Plus |
| arm_X | 19499537..19499715 | 17..195 | 100 | -> | Plus |
| arm_X | 19503496..19503522 | 196..222 | 100 | -> | Plus |
| arm_X | 19504414..19504495 | 223..304 | 100 | -> | Plus |
BS24389.pep Sequence
Translation from 16 to 594
> BS24389.pep
MAEANKRNIPIKLGDFSVIDTEFSNIRERFDSEMRKMEEEMAKFRHELMN
REANFFESTSSTKKTTTTSSTTNSALPSRIPKQQNYVSDISSPLIQDEGD
NKVLKLRFDVSQYAPEEIVVKTVDQKLLVHAKHEEKSDTKSVYREYNREF
LLPKGVNPESIRSSLSKDGVLTVDAPLPALTAGETLIPIAHK*
BS24389.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14207-PB | 192 | CG14207-PB | 1..192 | 1..192 | 965 | 100 | Plus |
| CG14207-PD | 183 | CG14207-PD | 1..183 | 1..192 | 902 | 95.3 | Plus |
| CG14207-PA | 183 | CG14207-PA | 1..183 | 1..192 | 902 | 95.3 | Plus |
| CG14207-PC | 154 | CG14207-PC | 10..154 | 54..192 | 650 | 91.7 | Plus |
| l(2)efl-PC | 187 | CG4533-PC | 75..161 | 100..185 | 194 | 43.7 | Plus |
