BS24391.complete Sequence
733 bp assembled on 2011-02-01
GenBank Submission: KX806295
> BS24391.complete
GAAGTTATCAGTCGACATGTATTCAAAGGCGGGATTTGTTCTAATTTTCG
TGCTGGGTCTAGTGTCCAGCAGCTGGGGATTCCTGGAGCATGACAGCTGG
ATTACAGTGGAGCTCCAGCACTCGCTGGCTGCAAACTCGGAAAGTTTCTC
CTTCCGCGGGAATGTGACGATTCCCAGTCTCAACTCTGGTCTGGCCAATG
TGGAGCAACCAGATCTGAGCACTGCCGATCTGGACTTGCTGAAGAAACTG
GCCCTTGGAAACGAGTTCTACCGTTTGAAGGCCACGGTGGTGTATTCAAA
TGGAGCTAAGGCGCAGTTCATCACTTCCAACAAGGCCTGTCGCCTGCTGC
AAGCCCAATTGAATGACGTGCTTTGGGTGTCGCTCGAACCCTCCGGATAC
GTAACCGGCATCACTGTGTCCCAGGACACGGCCCCGGCCACTATAGAGTG
CACCCAGGAAGACGTGAATAAGCTACTGGAAACGCAATTCAGCACCGATG
TCCTCATCCGCCACGCTGAACTGGCCCCCGTGCCCGATACTGCTGGCTTT
ATTCAGAAGGTGGAGCGGGAGCGCGAGGCCAGGGAGCGCGGGGAGGTTCG
GGATAACCGCGGCTTCTTTGCCAAATACTGGATGTACATCGTTCCGGTAG
TTCTGTTGGTCTTCATTTCGGGAGCCACCAACCAGGACGGTGCAAAATAG
AAGCTTTCTAGACCATTCGTGTGGCCCTAAAGG
BS24391.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:52:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32441-RC | 684 | CG32441-PC | 1..684 | 17..700 | 3420 | 100 | Plus |
CG32441-RD | 645 | CG32441-PD | 21..645 | 76..700 | 3125 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:52:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32441-RC | 887 | CG32441-RC | 71..754 | 17..700 | 3420 | 100 | Plus |
CG32441-RD | 902 | CG32441-RD | 145..769 | 76..700 | 3125 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:52:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21575225..21575610 | 243..628 | 1930 | 100 | Plus |
3L | 28110227 | 3L | 21574743..21574911 | 76..244 | 845 | 100 | Plus |
3L | 28110227 | 3L | 21575670..21575741 | 629..700 | 360 | 100 | Plus |
3L | 28110227 | 3L | 21574627..21574687 | 17..77 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:52:35 has no hits.
BS24391.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 16:02:00 Download gff for
BS24391.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32441-RC | 69..755 | 17..706 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:39:33 Download gff for
BS24391.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32441-RC | 71..757 | 17..706 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:44:47 Download gff for
BS24391.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32441-RC | 71..757 | 17..706 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:44:47 Download gff for
BS24391.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21574627..21574686 | 17..76 | 100 | -> | Plus |
3L | 21574744..21574911 | 77..244 | 100 | -> | Plus |
3L | 21575227..21575610 | 245..628 | 100 | -> | Plus |
3L | 21575670..21575744 | 629..706 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:39:33 Download gff for
BS24391.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21567727..21567786 | 17..76 | 100 | -> | Plus |
arm_3L | 21567844..21568011 | 77..244 | 100 | -> | Plus |
arm_3L | 21568327..21568710 | 245..628 | 100 | -> | Plus |
arm_3L | 21568770..21568844 | 629..706 | 96 | | Plus |
BS24391.pep Sequence
Translation from 16 to 699
> BS24391.pep
MYSKAGFVLIFVLGLVSSSWGFLEHDSWITVELQHSLAANSESFSFRGNV
TIPSLNSGLANVEQPDLSTADLDLLKKLALGNEFYRLKATVVYSNGAKAQ
FITSNKACRLLQAQLNDVLWVSLEPSGYVTGITVSQDTAPATIECTQEDV
NKLLETQFSTDVLIRHAELAPVPDTAGFIQKVEREREARERGEVRDNRGF
FAKYWMYIVPVVLLVFISGATNQDGAK*
BS24391.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32441-PC | 227 | CG32441-PC | 1..227 | 1..227 | 1154 | 100 | Plus |
CG32441-PD | 214 | CG32441-PD | 2..214 | 15..227 | 1056 | 97.2 | Plus |