Clone BS24391 Report

Search the DGRC for BS24391

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:243
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCG32441-RC
Protein status:BS24391.pep: gold
Sequenced Size:733

Clone Sequence Records

BS24391.complete Sequence

733 bp assembled on 2011-02-01

GenBank Submission: KX806295

> BS24391.complete
GAAGTTATCAGTCGACATGTATTCAAAGGCGGGATTTGTTCTAATTTTCG
TGCTGGGTCTAGTGTCCAGCAGCTGGGGATTCCTGGAGCATGACAGCTGG
ATTACAGTGGAGCTCCAGCACTCGCTGGCTGCAAACTCGGAAAGTTTCTC
CTTCCGCGGGAATGTGACGATTCCCAGTCTCAACTCTGGTCTGGCCAATG
TGGAGCAACCAGATCTGAGCACTGCCGATCTGGACTTGCTGAAGAAACTG
GCCCTTGGAAACGAGTTCTACCGTTTGAAGGCCACGGTGGTGTATTCAAA
TGGAGCTAAGGCGCAGTTCATCACTTCCAACAAGGCCTGTCGCCTGCTGC
AAGCCCAATTGAATGACGTGCTTTGGGTGTCGCTCGAACCCTCCGGATAC
GTAACCGGCATCACTGTGTCCCAGGACACGGCCCCGGCCACTATAGAGTG
CACCCAGGAAGACGTGAATAAGCTACTGGAAACGCAATTCAGCACCGATG
TCCTCATCCGCCACGCTGAACTGGCCCCCGTGCCCGATACTGCTGGCTTT
ATTCAGAAGGTGGAGCGGGAGCGCGAGGCCAGGGAGCGCGGGGAGGTTCG
GGATAACCGCGGCTTCTTTGCCAAATACTGGATGTACATCGTTCCGGTAG
TTCTGTTGGTCTTCATTTCGGGAGCCACCAACCAGGACGGTGCAAAATAG
AAGCTTTCTAGACCATTCGTGTGGCCCTAAAGG

BS24391.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:52:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG32441-RC 684 CG32441-PC 1..684 17..700 3420 100 Plus
CG32441-RD 645 CG32441-PD 21..645 76..700 3125 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:52:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG32441-RC 887 CG32441-RC 71..754 17..700 3420 100 Plus
CG32441-RD 902 CG32441-RD 145..769 76..700 3125 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:52:34
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21575225..21575610 243..628 1930 100 Plus
3L 28110227 3L 21574743..21574911 76..244 845 100 Plus
3L 28110227 3L 21575670..21575741 629..700 360 100 Plus
3L 28110227 3L 21574627..21574687 17..77 305 100 Plus
Blast to na_te.dros performed on 2014-11-26 21:52:35 has no hits.

BS24391.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 16:02:00 Download gff for BS24391.complete
Subject Subject Range Query Range Percent Splice Strand
CG32441-RC 69..755 17..706 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:39:33 Download gff for BS24391.complete
Subject Subject Range Query Range Percent Splice Strand
CG32441-RC 71..757 17..706 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:44:47 Download gff for BS24391.complete
Subject Subject Range Query Range Percent Splice Strand
CG32441-RC 71..757 17..706 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:44:47 Download gff for BS24391.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21574627..21574686 17..76 100 -> Plus
3L 21574744..21574911 77..244 100 -> Plus
3L 21575227..21575610 245..628 100 -> Plus
3L 21575670..21575744 629..706 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:39:33 Download gff for BS24391.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21567727..21567786 17..76 100 -> Plus
arm_3L 21567844..21568011 77..244 100 -> Plus
arm_3L 21568327..21568710 245..628 100 -> Plus
arm_3L 21568770..21568844 629..706 96   Plus

BS24391.pep Sequence

Translation from 16 to 699

> BS24391.pep
MYSKAGFVLIFVLGLVSSSWGFLEHDSWITVELQHSLAANSESFSFRGNV
TIPSLNSGLANVEQPDLSTADLDLLKKLALGNEFYRLKATVVYSNGAKAQ
FITSNKACRLLQAQLNDVLWVSLEPSGYVTGITVSQDTAPATIECTQEDV
NKLLETQFSTDVLIRHAELAPVPDTAGFIQKVEREREARERGEVRDNRGF
FAKYWMYIVPVVLLVFISGATNQDGAK*

BS24391.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG32441-PC 227 CG32441-PC 1..227 1..227 1154 100 Plus
CG32441-PD 214 CG32441-PD 2..214 15..227 1056 97.2 Plus