BS24392.complete Sequence
482 bp assembled on 2011-02-01
GenBank Submission: KX800888
> BS24392.complete
GAAGTTATCAGTCGACATGCCGCCCAAGCGTCCGCCACCGCTCGTGCCGA
AGAAGCCAAATCCCAGCATGAACTACGAGGTGTTGATCTACCTCAACTCG
TTCTACTTTGGCATGTTCGCCTGTTGCGAGATGGCCATGGGCCTCCTGAA
GGCCATCAATCTCAGCTACACGGGACATACTCTAGCCCTGGACACGGGGG
TGATGATTAGCTTCATTGTCTTTGAGACGATCCGATTGATAATGGGGCGC
ATGAGTTCGCTGGCCGATCGAGGCTGGTCGGCCATACTGTCGGTCTTCAT
GACCGCCCCCTGCTTTGTGGGCGTCTCCTATCTACTGCTGCTCCAGACCT
ACCGACTGCGCCTGGAGTACTGCCTGTGCACGCTGCAGATCGCCCTTTAC
CTGACCGAGGTGTGGTATGCCATCGTCTTCGTTTTCTCGCTGTGTCGTCC
AGTAACTTATGATTAGAAGCTTTCTAGACCAT
BS24392.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:52:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11760-RB | 450 | CG11760-PB | 1..450 | 17..466 | 2250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:52:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11760-RB | 1908 | CG11760-RB | 136..585 | 17..466 | 2250 | 100 | Plus |
| CG8116-RC | 1826 | CG8116-RC | 1289..1484 | 271..466 | 980 | 100 | Plus |
| CG8116-RB | 2812 | CG8116-RB | 1294..1489 | 271..466 | 980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:52:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8719333..8719589 | 17..273 | 1285 | 100 | Plus |
| 3R | 32079331 | 3R | 8719802..8719997 | 271..466 | 980 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:52:55 has no hits.
BS24392.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 16:02:01 Download gff for
BS24392.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11760-RB | 136..585 | 17..466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:39:43 Download gff for
BS24392.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11760-RB | 136..585 | 17..466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:44:57 Download gff for
BS24392.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11760-RB | 136..585 | 17..466 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:44:57 Download gff for
BS24392.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8719333..8719588 | 17..272 | 100 | -> | Plus |
| 3R | 8719804..8719997 | 273..466 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:39:43 Download gff for
BS24392.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4545055..4545310 | 17..272 | 100 | -> | Plus |
| arm_3R | 4545526..4545719 | 273..466 | 100 | | Plus |
BS24392.pep Sequence
Translation from 16 to 465
> BS24392.pep
MPPKRPPPLVPKKPNPSMNYEVLIYLNSFYFGMFACCEMAMGLLKAINLS
YTGHTLALDTGVMISFIVFETIRLIMGRMSSLADRGWSAILSVFMTAPCF
VGVSYLLLLQTYRLRLEYCLCTLQIALYLTEVWYAIVFVFSLCRPVTYD*
BS24392.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:59:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11760-PB | 149 | CG11760-PB | 1..149 | 1..149 | 786 | 100 | Plus |
| CG8116-PC | 136 | CG8116-PC | 2..135 | 15..148 | 346 | 48.5 | Plus |
| CG8116-PB | 136 | CG8116-PB | 2..135 | 15..148 | 346 | 48.5 | Plus |
| CG8116-PA | 136 | CG8116-PA | 2..135 | 15..148 | 346 | 48.5 | Plus |
