BS24420.complete Sequence
497 bp assembled on 2011-02-01
GenBank Submission: KX801004
> BS24420.complete
GAAGTTATCAGTCGACATGAATGTCCTGCTCCGTTGTACGTTCCTGCTGC
TCACCCTGGCCATATGTGGCAGCTGGGCCATTCGATGCTACCAGTGCTCC
TCCGACCAGGATCGCAAGGGACACGACAGCTGTGGCGCCTACAAGAGATT
CAACCGCACCGAGCACATTTCCATTGAGTGCAACAGCGACGAGAGCCACA
TGCCAGGATCCTTCTGCATGAAGGTGGTGCAGCAGGGACCGAGAGGATTC
ATCTGGGACGGTCGTTGGCGCCAGGTGATCCGACGATGTGCATCCGTTTC
CGATACCGGAGTGGTTGGCGTCTGTAACTGGGGAGTCTACGAAAACGGAG
TGTACTGGGAGGAGTGCTACTGCTCCAGCGACAGCTGCAATGGTTCCAGC
TTAGTTCAAATGCACGGATCCCTGCAGCTTCTGTTGGGACTCCTGTTGAT
TGGCGTTGCCTCCAGAATATTTAGAAGTTAAAAGCTTTCTAGACCAT
BS24420.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:59:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6583-RA | 465 | CG6583-PA | 1..465 | 17..481 | 2325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:59:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6583-RA | 1071 | CG6583-RA | 113..577 | 17..481 | 2325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:59:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12171698..12171924 | 481..255 | 1135 | 100 | Minus |
| 2L | 23513712 | 2L | 12172116..12172303 | 255..68 | 940 | 100 | Minus |
| 2L | 23513712 | 2L | 12172422..12172474 | 69..17 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:59:23 has no hits.
BS24420.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 16:02:18 Download gff for
BS24420.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6583-RA | 96..558 | 17..479 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:42:58 Download gff for
BS24420.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6583-RA | 113..575 | 17..479 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:47:47 Download gff for
BS24420.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6583-RA | 113..575 | 17..479 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:47:47 Download gff for
BS24420.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12171700..12171924 | 255..479 | 100 | <- | Minus |
| 2L | 12172117..12172302 | 69..254 | 100 | <- | Minus |
| 2L | 12172423..12172474 | 17..68 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:42:58 Download gff for
BS24420.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12171700..12171924 | 255..479 | 100 | <- | Minus |
| arm_2L | 12172117..12172302 | 69..254 | 100 | <- | Minus |
| arm_2L | 12172423..12172474 | 17..68 | 100 | | Minus |
BS24420.pep Sequence
Translation from 16 to 480
> BS24420.pep
MNVLLRCTFLLLTLAICGSWAIRCYQCSSDQDRKGHDSCGAYKRFNRTEH
ISIECNSDESHMPGSFCMKVVQQGPRGFIWDGRWRQVIRRCASVSDTGVV
GVCNWGVYENGVYWEECYCSSDSCNGSSLVQMHGSLQLLLGLLLIGVASR
IFRS*
BS24420.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:00:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6583-PA | 154 | CG6583-PA | 1..154 | 1..154 | 850 | 100 | Plus |
