BS24455.complete Sequence
746 bp assembled on 2011-02-01
GenBank Submission: KX802484
> BS24455.complete
GAAGTTATCAGTCGACATGATGGCACTGCGGAAAACTTTGGTCTTCAACA
GTGCGCTTCTGTTGGTTCTGCTGCTGGCGGAGTCCCAAGCCAAGCCCTCG
CAGGATTTAAACAAACCGCAGACGAAGGAGCCAAGTGATCTGGGTGCAGG
AGCTGGAGCAGCACGAGGAGTGCCGGTGGCTGCCAAAAATAAGACAGCTG
TCGTGGAGGATACTTCCGACGATTCCGACTCAGAGGCGGAATCGGAGGAG
CAGCAGCGGCGGTCATATCCCCACCGCGACGAGGACCAACTGAACTCGGC
CACCAATTTGGTTTTGGCACAGAACTACAAGTACGATGTGGAGATCCTGG
AATCCGGCGATGCCGACCAAGACGACAGTAGCATGGATGACGTGGACGAT
CTGGAGGAGCGTTTCAAGGGACGCGGTGTGATCTTCAGCACGGACACCGA
AACCTTCGCCAACGAGAACATCGAGATGAGCCCGCTGAACGTGCAGGCGG
ATGCGGTTAGCCAGGGACATGTGCTGCTCGGCATCGTGGTGGTGGCACTG
GCCTTGGTCTCCATCGGCCTGTACGCCGGCCTGGTCATATGGCGCTCGCA
CCTGGAGCAGCGGTATGGAATGCGCGAACGACTGGTCAATCACGACTTGG
AGGATGAAGCGGCTGGTGTCGACGACGTCGATTATCAGGTCTATGCGCCA
ACCACGACGGCAGCTACGCCTAGGGCGTAGAAGCTTTCTAGACCAT
BS24455.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:00:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5835-RA | 714 | CG5835-PA | 1..714 | 17..730 | 3555 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:00:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5835-RA | 1344 | CG5835-RA | 225..938 | 17..730 | 3555 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:00:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19149234..19149634 | 607..207 | 1990 | 99.8 | Minus |
| 3R | 32079331 | 3R | 19151488..19151613 | 209..84 | 630 | 100 | Minus |
| 3R | 32079331 | 3R | 19149038..19149161 | 730..607 | 620 | 100 | Minus |
| 3R | 32079331 | 3R | 19153396..19153462 | 83..17 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:00:28 has no hits.
BS24455.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 16:02:21 Download gff for
BS24455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5835-RA | 219..932 | 17..730 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:43:34 Download gff for
BS24455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5835-RA | 225..938 | 17..730 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:48:21 Download gff for
BS24455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5835-RA | 225..938 | 17..730 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:48:21 Download gff for
BS24455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19149038..19149161 | 607..730 | 100 | <- | Minus |
| 3R | 19149235..19149632 | 209..606 | 99 | <- | Minus |
| 3R | 19151489..19151613 | 84..208 | 100 | <- | Minus |
| 3R | 19153396..19153462 | 17..83 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:43:34 Download gff for
BS24455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14979118..14979184 | 17..83 | 100 | | Minus |
| arm_3R | 14974760..14974883 | 607..730 | 100 | <- | Minus |
| arm_3R | 14974957..14975354 | 209..606 | 99 | <- | Minus |
| arm_3R | 14977211..14977335 | 84..208 | 100 | <- | Minus |
BS24455.pep Sequence
Translation from 16 to 729
> BS24455.pep
MMALRKTLVFNSALLLVLLLAESQAKPSQDLNKPQTKEPSDLGAGAGAAR
GVPVAAKNKTAVVEDTSDDSDSEAESEEQQRRSYPHRDEDQLNSATNLVL
AQNYKYDVEILESGDADQDDSSMDDVDDLEERFKGRGVIFSTDTETFANE
NIEMSPLNVQADAVSQGHVLLGIVVVALALVSIGLYAGLVIWRSHLEQRY
GMRERLVNHDLEDEAAGVDDVDYQVYAPTTTAATPRA*
BS24455.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:00:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5835-PA | 237 | CG5835-PA | 1..237 | 1..237 | 1186 | 100 | Plus |
