Clone BS24463 Report

Search the DGRC for BS24463

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:244
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG9601-RA
Protein status:BS24463.pep: full length peptide match
Sequenced Size:1604

Clone Sequence Records

BS24463.complete Sequence

1604 bp assembled on 2011-07-18

GenBank Submission: KX802499

> BS24463.complete
GAAGTTATCAGTCGACATGTCTATGGCTAAATACCTAAACCGATCCGTTG
GAAAAGCTGGCAAGGATGTGGCCGCCAGGATATGCACCCTTAAACCCACT
GAGCCGGAACACCATTCTATACACCTGACCGCTGGGGAGAATTTCGTGGG
ACGCAGCCGGGAGACCGGCATCCGAGATTCCAAGTGCTCGAAGCGACAGA
TTCAACTGCAAGTGGACCTAAAAAAGGCTGTAGTTTCACTTAAAGTCCTG
GGAGTTAATCCCTGCGGCGTCAATGGTCTGATGCTTATGCAGAACGGGGA
ACGCGAGCTGAAGCACGGAGACTTGGTGGAGATCGTTTACGGCAGGCATC
AGTTCGAGGTCGTCTTTAACCCTCCACCGGAGTATGACAAGGAGAAAGCT
GAGCCGTTGTCCACAACACTATCACCGTCAGAGAAATCCGAGAGGTGGGA
CTCATCTGGCAATGGTAAGCTGGTTATCTTTACCAGCGTCGGCGTTAAAG
GTTCTGAAAAGATAGCTGGCTACGACATGGACGGCACCATTATAAAAACA
AAATCGGGACTGGTGTTCCCCAAAAACACCGACGACTGGCAGATCATATT
TCCCGAAGTGCCGGAGAAACTAAAGAATCTCCACAAGGATGGGTTTAAAA
TCTGTCTCTTCACCAACCAAGGAGGCATTGCTCGTGGAAAAATCAACCTA
GATGACTTTAAGGTCAAGATCAAGCATATTGTGGCTAAACTGGGAGTTCC
AATTCAAGTATTTATAGCCATAGGTGATGGATTTTATCGCAAACCTTTGA
CGGGAATGTGGCAGCACTTAAAGAGTGAAATGAATGATGGCGTTGAGATT
CAGGAAGATCGATGTTTCTTCGTCGGCGATGCAGCCGGAAGACCGGAGAC
GGGCAAGGGAGCCACCAAGCGGCGCAAAGATCACTCTTTAGTAGACAGAC
TTTTTGCAGCCAACGTGGGAATTTCATTCTACACTCCAGAGGTTCATTTC
CTGGGCAAACAAGTGGAGCAGTGGAATAAGCCGGACTTTGAACCCACTAG
CGTTCAGGACCAAGTATCTCTGCTTGATCCGGATGACTTGACCCTCGATG
ACCACCCCTGCGAAATGGTCATCATGGTGGGTCTGCCAGGATCCGGAAAG
AGCCACTTTTGTTCCAGCTTTTTTCAACCGCGGGGCTACAAAATCGTCAA
TGCAGATACATTGGGTAGCACTCAAAACTGCCTGACTGCCTGTAAACGGT
TCCTGGACTCGGGCCAATCATGTGTGGTGGATAACACCAATGTGGATGCA
GCTTCTCGAAAAAAATTCTTGCAGTTGGCCAGCGAAAAGATGATTCCATG
CCGCTGCCTTGTGATGAATGTGCCCGTCGCCCAAGTGAAGCACAATATAG
CTTTCCGAGAGCTATCAGACTCCGCGCGCACCAAGATCAAGGACATGGTA
TTTAACATGATGAAGAAAAAGTACCAGGAACCCGCCCTAGACGAAGGATT
TATATCCATACACAAGGTGAACTTTAAGCCCAATTTTGCGGACGAAAAGC
AGGAAAAGCTATACAAAATGTACTTGGTCGAGAAATAAAAGCTTTCTAGA
CCAT

BS24463.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:43:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG9601-RA 1572 CG9601-PA 1..1572 17..1588 7860 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:43:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG9601-RA 1856 CG9601-RA 75..1646 17..1588 7860 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:43:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8341871..8343442 1588..17 7860 100 Minus
Blast to na_te.dros performed on 2014-11-26 21:43:42 has no hits.

BS24463.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-18 16:37:05 Download gff for BS24463.complete
Subject Subject Range Query Range Percent Splice Strand
CG9601-RA 56..1619 17..1580 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:34:53 Download gff for BS24463.complete
Subject Subject Range Query Range Percent Splice Strand
CG9601-RA 75..1638 17..1580 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:40:46 Download gff for BS24463.complete
Subject Subject Range Query Range Percent Splice Strand
CG9601-RA 75..1638 17..1580 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:40:46 Download gff for BS24463.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8341879..8343442 17..1580 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:34:53 Download gff for BS24463.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4167601..4169164 17..1580 100   Minus

BS24463.pep Sequence

Translation from 16 to 1587

> BS24463.pep
MSMAKYLNRSVGKAGKDVAARICTLKPTEPEHHSIHLTAGENFVGRSRET
GIRDSKCSKRQIQLQVDLKKAVVSLKVLGVNPCGVNGLMLMQNGERELKH
GDLVEIVYGRHQFEVVFNPPPEYDKEKAEPLSTTLSPSEKSERWDSSGNG
KLVIFTSVGVKGSEKIAGYDMDGTIIKTKSGLVFPKNTDDWQIIFPEVPE
KLKNLHKDGFKICLFTNQGGIARGKINLDDFKVKIKHIVAKLGVPIQVFI
AIGDGFYRKPLTGMWQHLKSEMNDGVEIQEDRCFFVGDAAGRPETGKGAT
KRRKDHSLVDRLFAANVGISFYTPEVHFLGKQVEQWNKPDFEPTSVQDQV
SLLDPDDLTLDDHPCEMVIMVGLPGSGKSHFCSSFFQPRGYKIVNADTLG
STQNCLTACKRFLDSGQSCVVDNTNVDAASRKKFLQLASEKMIPCRCLVM
NVPVAQVKHNIAFRELSDSARTKIKDMVFNMMKKKYQEPALDEGFISIHK
VNFKPNFADEKQEKLYKMYLVEK*

BS24463.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:58:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG9601-PA 523 CG9601-PA 1..523 1..523 2753 100 Plus