BS24475.complete Sequence
953 bp assembled on 2011-02-01
GenBank Submission: KX803037
> BS24475.complete
GAAGTTATCAGTCGACATGTATAGGTATTTGTTGAACATTTCTTACATCG
GCACGACTTTTCGTGGTATTCAAAAGACGGTGAACAAGCTGGAGCAGTCC
CGCCTGGACACAAAGTCCATACAAGGCTGTTTGGAGCTGGCGTTGCAGGT
TTTTCACCCAACAAACGAAATACACACCGTGCTGTCCAGTCGAACAGACG
CCGGTGTACACGCCCTGCACTCCACGGTGCAGGTGGACTTGGAGAGGCCT
AATGGGCAGCCCTATGATACAACTATATTAACTGGTGTGCTCAACCGAAC
CCTTAACAAACAGCGTCTTCCCATCCGAGTGCTCAGCAGTAAGTTGGTGG
CCAACTCCTTCCACTGCCGCTACGACGCCATTGGACGAACCTATCTCTAT
CGCTTTGCCGTGGCAAAGGTACCAACCCTGGGAGATTGCAGTCTCCGGAA
TAGGTCGTTCGAGACCTTTATACCAGTTGAAGAAATCGATCGTTGTTACT
TTCTGCAATCTTCTAGCTTCGATATCAAAAGAGTCCAGGCTGCAGCTCGA
ATGTTTATCGGCGTCCACGACTTTCGAACTTTCATGAGTGTTAGCCGACA
GAAAGTTTGTCGGGATCACCCAATGTTTACAGTGCGCAAAATCGACGAGA
TTAATATTCGTCCTGGTGAAACACGTGCATTGTCTTCGAACGCTATTCAG
GCCGCTGAAACATATAATTATTGGGACATCGAGATCAGGGCTAAATCATT
TCTTTACAAACAAGTAAGGCGCATTGTCGGCGCGCTAATCGCTTTGGGTA
ACGGACGTATCGACGAGAGGTGCCTATATCAGATGCTCACCGTTCCCTCG
AAGAATTCTTGGGATCACCGTGTGCTCCTGGCTCCAGCCTGTGGGCTTTA
CCTTTGCAGAGTGCACTACCGAGAAACGGACATTTAAAAGCTTTCTAGAC
CAT
BS24475.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:57:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34140-RA | 921 | CG34140-PA | 1..921 | 17..937 | 4590 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:57:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mkp-RB | 1732 | CG34099-RB | 59..981 | 15..937 | 4600 | 99.9 | Plus |
| CG34140-RA | 1730 | CG34140-RA | 57..979 | 15..937 | 4600 | 99.9 | Plus |
| Mkp-RA | 1727 | CG34099-RA | 59..976 | 15..937 | 4490 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:57:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 183273..183702 | 937..508 | 2150 | 100 | Minus |
| 3L | 28110227 | 3L | 183758..184073 | 507..192 | 1565 | 99.7 | Minus |
| 3L | 28110227 | 3L | 184132..184261 | 192..63 | 650 | 100 | Minus |
| 3L | 28110227 | 3L | 184318..184366 | 63..15 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:57:39 has no hits.
BS24475.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-01 16:02:13 Download gff for
BS24475.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34140-RA | 59..977 | 17..935 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:42:08 Download gff for
BS24475.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34140-RA | 59..977 | 17..935 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:47:03 Download gff for
BS24475.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34140-RA | 59..977 | 17..935 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:47:03 Download gff for
BS24475.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 183275..183702 | 508..935 | 100 | <- | Minus |
| 3L | 183758..184072 | 193..507 | 99 | <- | Minus |
| 3L | 184132..184260 | 64..192 | 100 | <- | Minus |
| 3L | 184318..184364 | 17..63 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:42:08 Download gff for
BS24475.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 183758..184072 | 193..507 | 99 | <- | Minus |
| arm_3L | 184132..184260 | 64..192 | 100 | <- | Minus |
| arm_3L | 184318..184364 | 17..63 | 100 | | Minus |
| arm_3L | 183275..183702 | 508..935 | 100 | <- | Minus |
BS24475.pep Sequence
Translation from 16 to 936
> BS24475.pep
MYRYLLNISYIGTTFRGIQKTVNKLEQSRLDTKSIQGCLELALQVFHPTN
EIHTVLSSRTDAGVHALHSTVQVDLERPNGQPYDTTILTGVLNRTLNKQR
LPIRVLSSKLVANSFHCRYDAIGRTYLYRFAVAKVPTLGDCSLRNRSFET
FIPVEEIDRCYFLQSSSFDIKRVQAAARMFIGVHDFRTFMSVSRQKVCRD
HPMFTVRKIDEINIRPGETRALSSNAIQAAETYNYWDIEIRAKSFLYKQV
RRIVGALIALGNGRIDERCLYQMLTVPSKNSWDHRVLLAPACGLYLCRVH
YRETDI*
BS24475.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:00:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34140-PA | 306 | CG34140-PA | 1..306 | 1..306 | 1590 | 100 | Plus |
