BS24536.complete Sequence
731 bp assembled on 2011-06-17
GenBank Submission: KX805249
> BS24536.complete
GAAGTTATCAGTCGACATGTATCCTTGCGTCGAGTTAAACGTAGAAGCCG
CTCCCACGGCAACAACAAGGTCTTCGGAGAAATCAAAGAGATCTCGCACG
GCATTCAGCAGTCTTCAGCTAATCGAACTAGAAAGGGAGTTCCATCTCAA
CAAATATTTAGCCCGAACCAGGCGAATCGAGATATCACAGCGTTTGGCAC
TCACAGAGAGACAGGTTAAGATCTGGTTCCAAAATCGTCGCATGAAACTC
AAGAAGTCGACCAATAGGAAGGGTGCCATTGGAGCGCTGACCACATCTAT
TCCACTTTCTTCCCAGTCGAGCGAAGATCTTCAAAAGGACGACCAGATCG
TAGAGCGTCTCCTTCGATATGCCAACACAAATGTGGAAACAGCTCCACTC
CGGCAGGTTGATCACGGTGTCCTGGAGGAGGGTCAAATTACACCACCCTA
TCAGAGCTACGATTACCTCCATGAATTTTCTCCTGAGCCCATGGCTCTTC
CCCAACTGCCCTTCAATGAATTCGATGCTAACTGGGCGAGTTCATGGCTG
GGCCTTGAGCCAACGATTCCTATCGCAGAAAATGTAATTGAACACAATAC
ACAGGATCAGCCAATGATACAGAATTTCTGCTGGGACTCGAATAGCTCTT
CTGCTTCATCGTCGGATATTTTGGATGTTGACTATGACTTTATTCAAAAT
TTGTTGAACTTTTAAAAGCTTTCTAGACCAT
BS24536.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:39:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| zen2-RB | 699 | CG1048-PB | 1..699 | 17..715 | 3495 | 100 | Plus |
| zen2-RA | 759 | CG1048-PA | 61..759 | 17..715 | 3495 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:39:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| zen2-RB | 940 | CG1048-RB | 128..827 | 17..716 | 3500 | 100 | Plus |
| zen2-RA | 935 | CG1048-RA | 123..822 | 17..716 | 3500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:39:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6743248..6743947 | 716..17 | 3500 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:39:02 has no hits.
BS24536.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:34:12 Download gff for
BS24536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| zen2-RB | 130..826 | 17..713 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:32 Download gff for
BS24536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| zen2-RA | 123..819 | 17..713 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:57:22 Download gff for
BS24536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| zen2-RA | 123..819 | 17..713 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:57:22 Download gff for
BS24536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6743251..6743947 | 17..713 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:32 Download gff for
BS24536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2568973..2569669 | 17..713 | 100 | | Minus |
BS24536.pep Sequence
Translation from 16 to 714
> BS24536.pep
MYPCVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLAR
TRRIEISQRLALTERQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQ
SSEDLQKDDQIVERLLRYANTNVETAPLRQVDHGVLEEGQITPPYQSYDY
LHEFSPEPMALPQLPFNEFDANWASSWLGLEPTIPIAENVIEHNTQDQPM
IQNFCWDSNSSSASSSDILDVDYDFIQNLLNF*
BS24536.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:12:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| zen2-PB | 232 | CG1048-PB | 1..232 | 1..232 | 1198 | 100 | Plus |
| zen2-PA | 252 | CG1048-PA | 21..252 | 1..232 | 1198 | 100 | Plus |
| zen-PA | 353 | CG1046-PA | 75..147 | 10..80 | 230 | 67.1 | Plus |
| Antp-PK | 361 | CG1028-PK | 275..347 | 18..90 | 218 | 57.5 | Plus |
| Antp-PG | 361 | CG1028-PG | 275..347 | 18..90 | 218 | 57.5 | Plus |
