BS24546.complete Sequence
941 bp assembled on 2011-06-21
GenBank Submission: KX801179
> BS24546.complete
GAAGTTATCAGTCGACATGGAATCGCGTCTGGGTCTGCTCATCGCCCTGC
TGCTGGCGGCCTTTCAGGCCTGGGCCATGGAAGCACCGTCGAACTATAAT
CAGAACTCTACTGAGAGTGGACTGCTGCGGACAGTGCGTCATATCTATGG
GCAGTGTGCATATAGCGAGGACGTTTTCTGGTGCTGCAAGATACAGGGAG
TTCGCCTGCTGGGACGGGCTCTGAAGGTCCCTCAACTGGGGATTGTGGAT
GGCGTTAGCTTGGTGCGGCGGGAATCCTTTACCCAGGACACGCGGAGTGG
ACGCTCTAGCCTGCTCGAGAGCCAGCTCAGCAATCGCGATCTCGAGCACT
TGTCGGGGAAGAGTCTGGACGCCCTGCTGCTGGAGCGGTTCCTCAACTTT
GTCCATAGTCACCAGCTGCAGGTCAACCTACCACGGTTGCTGCGGTTTGG
TGAGCGGAATGTCCAGGATTGGCTGCTGCACGTGGTCGGCTACTTTATGC
CAGCCAGCGAAAGCGAGGGTCGCAAAAAGAAGGATGACAAAAAGTATCTG
GGACCCTTCATTGCCGCCGTTCTGTTAAAGACCGCTATTCTAAAGATGGC
ATACCACTCCATTGCCATTGTAGCGGGAAAGGCGCTTATTGTGGGCAAGA
TTGCGCTGATCATCAGTGCTATAATCGGTCTGAAAAAACTTGTGGGTCAC
GACGGCGGCGAGAAGACCACCTACGAGATCGTCAAGCATCCGCAGGTGCA
GCAGAGCCACACATACTCGTCCAGCCACCAGGGTGAGTACGATACGGGTG
GCCATGACGGAGGATCCTACCACCGCAGCATCGACGACGAGATGATGATG
CAGGACAAGGCTTACCAGGCCTGGATGCCCCACGTGGCCGCATCCCCTTC
GCCCGTCGCCAAGGGATCCCGATAAAAGCTTTCTAGACCAT
BS24546.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:25:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi11-RA | 909 | CG15596-PA | 1..909 | 17..925 | 4545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:25:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi11-RA | 1167 | CG15596-RA | 70..979 | 17..926 | 4550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:25:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6267779..6268688 | 926..17 | 4550 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:25:43 has no hits.
BS24546.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-21 15:52:40 Download gff for
BS24546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi11-RA | 1..907 | 17..923 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:44 Download gff for
BS24546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi11-RA | 70..976 | 17..923 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:12:54 Download gff for
BS24546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi11-RA | 70..976 | 17..923 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:12:54 Download gff for
BS24546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6267782..6268688 | 17..923 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:44 Download gff for
BS24546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2093504..2094410 | 17..923 | 100 | | Minus |
BS24546.pep Sequence
Translation from 16 to 924
> BS24546.pep
MESRLGLLIALLLAAFQAWAMEAPSNYNQNSTESGLLRTVRHIYGQCAYS
EDVFWCCKIQGVRLLGRALKVPQLGIVDGVSLVRRESFTQDTRSGRSSLL
ESQLSNRDLEHLSGKSLDALLLERFLNFVHSHQLQVNLPRLLRFGERNVQ
DWLLHVVGYFMPASESEGRKKKDDKKYLGPFIAAVLLKTAILKMAYHSIA
IVAGKALIVGKIALIISAIIGLKKLVGHDGGEKTTYEIVKHPQVQQSHTY
SSSHQGEYDTGGHDGGSYHRSIDDEMMMQDKAYQAWMPHVAASPSPVAKG
SR*
BS24546.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:34:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi11-PA | 302 | CG15596-PA | 1..302 | 1..302 | 1554 | 100 | Plus |
| Osi7-PA | 288 | CG1153-PA | 43..285 | 43..288 | 256 | 33.3 | Plus |
| Osi8-PA | 274 | CG15591-PA | 44..262 | 26..288 | 228 | 28.1 | Plus |
| Osi9-PA | 233 | CG15592-PA | 61..215 | 76..253 | 220 | 34.1 | Plus |
| Osi16-PA | 278 | CG31561-PA | 54..256 | 47..267 | 203 | 30.9 | Plus |
