Clone BS24548 Report

Search the DGRC for BS24548

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:245
Well:48
Vector:pDNR-Dual
Associated Gene/Transcriptmei-P22-RA
Protein status:BS24548.pep: full length peptide match
Sequenced Size:1028

Clone Sequence Records

BS24548.complete Sequence

1028 bp assembled on 2011-06-17

GenBank Submission: KX804657

> BS24548.complete
GAAGTTATCAGTCGACATGGACAGGACAACAGTTGTCCCGAGTCCGGCCT
CCACCTACTGCTCCTTTATGGGTGGCTCCCAGCACTCCCCATTGCGGCGA
TCACAGCGCCTCATCGACAAGGAAAACCGGGATCTGCAGAAGATTCCGCC
CAAAAGTCTTTCTCCTCAGTTATTTGGAAACACTGAAGATGATTACAGTG
AACTATTGTTGCAGCAAGGGAAAGTGGTTCACCTGAAGCCTGCAGCTAAG
TTGGTGCCCGTGAGATCCTCGGATAATCTAGTCCATCTTGGATCCCGGGA
TAAAGTTGTCCCCTTGAAAACTTCCAATAGAATCGTTCACCTGAAGCCTC
CATATAAGATTATCCACCTCAAAAGTTTAGATGAAGTTGAAAAGACCGTA
AAGAAGAAGAATAATATTCAGAAAGAAGTTCATCAAAGGAATTCACAAAG
GAGAAGCATTCAATGCACTCCCAAAAAACGTGGTCGAAAACCAAAGCAAC
CGGCTAAGAAACTGCAGTCAAGAATTTCCACCGATCAGCTAGGAAGCACA
CCATCGCCATCCAAGCTGCCTGCCAAATATCCCGCCCATTTTGTTCATCA
ACTTCCGCCCGCTGAGGATTCCAGCTGTGCCACTCGAAGACGATCCTTAT
CTGCTCCAGCTATGCAACTTAGCGATCTAAGCCTCACACCCGATGAGATC
CAAACTCCGGAGCGGCGCGGTGAAATCGTAAACAAATCGCCATCGGATCT
CGACTCCGATGTCTCCTTGAACTTCTCGCTGTCCGATTCCATTGGCGAGA
TCTTCGGCACCAAGGACATCAGCAGCATTCTGACCATGCAGCGGCCGCGT
CAGTACATTTTGCTGGAGGAGCATCTGCCCACACTGGCCACCATGTTGAA
CGTTGACTTGGAGCGACTGCGCTGCGTGCTGGATATCACTCAGGGCTTGA
GCCACGAGCAAATCCTGCGCTTTCCGATAAAACATGAAGAGGATGAATTG
GAAGTACCTTAGAAGCTTTCTAGACCAT

BS24548.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:39:17
Subject Length Description Subject Range Query Range Score Percent Strand
mei-P22-RA 996 CG14827-PA 1..996 17..1012 4980 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:39:18
Subject Length Description Subject Range Query Range Score Percent Strand
mei-P22-RA 996 CG14827-RA 1..996 17..1012 4980 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:39:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7244388..7245384 17..1013 4985 100 Plus
Blast to na_te.dros performed on 2014-11-26 14:39:16 has no hits.

BS24548.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:46:48 Download gff for BS24548.complete
Subject Subject Range Query Range Percent Splice Strand
mei-P22-RA 1..996 17..1012 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:38 Download gff for BS24548.complete
Subject Subject Range Query Range Percent Splice Strand
mei-P22-RA 1..996 17..1012 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:57:29 Download gff for BS24548.complete
Subject Subject Range Query Range Percent Splice Strand
mei-P22-RA 1..996 17..1012 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:57:29 Download gff for BS24548.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7244388..7245383 17..1012 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:38 Download gff for BS24548.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7237488..7238483 17..1012 100   Plus

BS24548.pep Sequence

Translation from 16 to 1011

> BS24548.pep
MDRTTVVPSPASTYCSFMGGSQHSPLRRSQRLIDKENRDLQKIPPKSLSP
QLFGNTEDDYSELLLQQGKVVHLKPAAKLVPVRSSDNLVHLGSRDKVVPL
KTSNRIVHLKPPYKIIHLKSLDEVEKTVKKKNNIQKEVHQRNSQRRSIQC
TPKKRGRKPKQPAKKLQSRISTDQLGSTPSPSKLPAKYPAHFVHQLPPAE
DSSCATRRRSLSAPAMQLSDLSLTPDEIQTPERRGEIVNKSPSDLDSDVS
LNFSLSDSIGEIFGTKDISSILTMQRPRQYILLEEHLPTLATMLNVDLER
LRCVLDITQGLSHEQILRFPIKHEEDELEVP*

BS24548.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:12:21
Subject Length Description Subject Range Query Range Score Percent Strand
mei-P22-PA 331 CG14827-PA 1..331 1..331 1693 100 Plus