BS24551.complete Sequence
2006 bp assembled on 2011-07-19
GenBank Submission: KX803525
> BS24551.complete
GAAGTTATCAGTCGACATGGGCGATCAGCGCGTACACAAACCGCGGACAG
CGAAGACAAGAACCCTTCGCGTCAATAGGATATTATTACCGATGTTGCTT
CTGTTTTCAGGAGAAACTACATCAGTTGTGACCCAATTGTTTTCGGTGGA
TAGCAGTGGCCTCGGCATTTCGCTGATGCAATCGGTGGCCATAGCTCTGA
ATGCATCCAGCCTCGCCCTGGCCAACAACACCGCCTGGCCGCTGCAACAC
GAACCGCCAGAGGATCGGTTGGAGATCGAGAGCTATGACTATATAGTGGT
GGGTGCAGGTAGTGCCGGATCCATTGTGGCCAGTCGATTGAGTGAGCTGT
GCCAGGTGAAGGTCCTGCTGCTGGAGGAGGGACAATTACCACCGCTGGAA
TCGGAAATCTTTGGTCTGACCGGTGCACTGCATCATGACGAGCGGTACAT
GTTCCTGGAGGAAGCAGTGCCCAATCCGAAATGCTGCCAGGCAATGGCAT
CCATGCACGGCTGCGTTTGGTGGCATGGTCGCATGATGGGCGGTGGTGGT
GCCATTAATGGCAATATCTTTATACCCGGCAGTCGGGAGAACTTCAGACG
CTGGAATTCAACCGGCTGGGATTGGACGCAGGTCCATAAGACCTACTCTC
GCCTGCAACAACGTCTGAATCCCTCCTATCTTCAACCGAATAAGCTAAAC
TTGAAGTTGGCCAACCTAATATACTCCGGTTCCGCAGAACTGGGTGTACC
ACGGATGAAACAGCCATTGATAGCGGGTGCTACGTTCGGTTACACTCATC
ATGTCCCGGTGACCGTTAACCAAAGACGAAGGGCCAGCAGCGCACGTTTG
TATTTGGCCAATGATCAAGTGAATAGAAGAGGTAACCTAAAGGTAATACG
AGGAGCTCAAGTTCAGCGGGTACTACTAAATGCGGCTGGATCCCGAGCAA
CTGGAGTGATTTATACCCTAAATGGTGTGGAACACACGGCGAAAACGTTA
GGCGAAGTCATCCTAAGCGCAGGAACCCTCAATTCCGCCAAGTTGCTTCT
GCTTTCGGGCATCGGGCCGCGGGAGGAGCTACAAAGATGGAATATAACTA
CGCACCAGGACCTTCCAGTGGGTCGAAATCTACAAGATCATGGAATGATG
CCATTGTTTCTGCTCTTCGGTTCGAATTGTGCCGTCAACAGTACACGGGA
TCCCACAGAAAATCCCTATGCTCCTGTATCTATCACACAGTATCTACTGG
ATAATCAGAAGGGTCCTTTGGCCAGTGGCTTCTACATGATGGGCTACATC
AATTCCAGTTCGCCGAGCAGCAGTCGTGGTGAACCCGATCTGCATGTGGT
GGCCCACACTCTTTTGCCCAAAGGAAGTACCGGAAGCTTTGGCTATTTGG
GCTTTCGGCCAGAGTTGATTCAGGCTCAGCAGGATATCTTGCAGAAAGGA
GATCTACTGCAAATAATGGGCTCACTGTTGCGTCCCCTTTCACATGGCAA
AGTGAGTCTATCGAGTAAAAATTCCGCTGATCAGGCAAAAATCGAAAACC
ACTATGGCGAGGCTGTAGAGGATCAGCAGACGCTACTTCGCTATGTGCGA
TATATTCAAAAGTTGAGCAAAACCCGACCTTTTCGTCGATGTGGTCTACG
ACTTTGGAAGCCGCCCCTCCACGAATGCGATACATTAGCTGCCGATTCCG
ATGACTACTGGTTGTGTTACATCCGATATTTCTATGTGGGTGCCTGGCAT
TCCGTGGGCACTTGTCGCATGGCTCCAAGAAAGGGAGTGGATTCCCAGGA
GAATGGAGGCGTGGTGGACGAAAGATTGAGGGTTCATGGGGTCAAGGGTC
TTCGTGTGGTGGATGCCAGCATTATGCCGGAATTGCCAGCGGGCAATACG
AATGGACCCGCCATGATGATTGGTGAAAAAGGGGCACAAATGATTCTCGA
CGATCGGGAGGCGAATAATGAGGTGATTCAGGAATGCTGAAAGCTTTCTA
GACCAT
BS24551.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:01:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eo-RA | 1974 | CG9504-PA | 1..1974 | 17..1990 | 9870 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:01:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eo-RA | 2045 | CG9504-RA | 57..2030 | 17..1990 | 9870 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:01:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14916771..14918744 | 1990..17 | 9870 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:01:54 has no hits.
BS24551.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-19 12:54:11 Download gff for
BS24551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eo-RA | 1..1973 | 17..1989 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:44:23 Download gff for
BS24551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eo-RA | 57..2029 | 17..1989 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:49:09 Download gff for
BS24551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eo-RA | 57..2029 | 17..1989 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:49:09 Download gff for
BS24551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14916772..14918744 | 17..1989 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:44:23 Download gff for
BS24551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14810805..14812777 | 17..1989 | 100 | | Minus |
BS24551.pep Sequence
Translation from 16 to 1989
> BS24551.pep
MGDQRVHKPRTAKTRTLRVNRILLPMLLLFSGETTSVVTQLFSVDSSGLG
ISLMQSVAIALNASSLALANNTAWPLQHEPPEDRLEIESYDYIVVGAGSA
GSIVASRLSELCQVKVLLLEEGQLPPLESEIFGLTGALHHDERYMFLEEA
VPNPKCCQAMASMHGCVWWHGRMMGGGGAINGNIFIPGSRENFRRWNSTG
WDWTQVHKTYSRLQQRLNPSYLQPNKLNLKLANLIYSGSAELGVPRMKQP
LIAGATFGYTHHVPVTVNQRRRASSARLYLANDQVNRRGNLKVIRGAQVQ
RVLLNAAGSRATGVIYTLNGVEHTAKTLGEVILSAGTLNSAKLLLLSGIG
PREELQRWNITTHQDLPVGRNLQDHGMMPLFLLFGSNCAVNSTRDPTENP
YAPVSITQYLLDNQKGPLASGFYMMGYINSSSPSSSRGEPDLHVVAHTLL
PKGSTGSFGYLGFRPELIQAQQDILQKGDLLQIMGSLLRPLSHGKVSLSS
KNSADQAKIENHYGEAVEDQQTLLRYVRYIQKLSKTRPFRRCGLRLWKPP
LHECDTLAADSDDYWLCYIRYFYVGAWHSVGTCRMAPRKGVDSQENGGVV
DERLRVHGVKGLRVVDASIMPELPAGNTNGPAMMIGEKGAQMILDDREAN
NEVIQEC*
BS24551.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:02:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eo-PA | 657 | CG9504-PA | 1..657 | 1..657 | 3436 | 100 | Plus |
| CG9509-PB | 646 | CG9509-PB | 31..624 | 48..646 | 749 | 33.8 | Plus |
| CG9509-PA | 646 | CG9509-PA | 31..624 | 48..646 | 749 | 33.8 | Plus |
| CG6142-PA | 616 | CG6142-PA | 34..605 | 76..645 | 695 | 32.2 | Plus |
| CG9518-PC | 703 | CG9518-PC | 9..622 | 35..652 | 695 | 30.7 | Plus |
