BS24552.complete Sequence
1061 bp assembled on 2011-06-21
GenBank Submission: KX804629
> BS24552.complete
GAAGTTATCAGTCGACATGGTCACACATGGTGTCCTCGGCTTGGGATTTC
TCATTGTTGGTCTAATTCTGGCCACGGACGCCTGGCTGTTATCCGAATCT
GGTTTAAACGAATCCAGCTACAAAGTCCGTCATCTATCGATGCACTTTTC
GCGAGTGTTTCTCAGCGTAAATGTAGAAAGCAACGATGCGCCCACTTTGA
TCGAGGCGCAATGGCCGGTTTCCTATTTTCCCATGCCCACTGTCGTCTTT
CCCCACATCGATGTTCATTCCATGGGGGATCATGATGATTGCTCTCTGGT
ACAACAGGCACACTGGTCCCAGGTGGATGCACTGAGTCGACTGTGGGTCA
TGGACATCGGATTTCCCGGCAGCACGTGCTCACCCCGTTTGTTTGTCTTC
GATCTGATGCGTAACAACGCGGAGCTATTGAGAATCGATTGTGGACACCA
TATAGGTGCTAATGACACCCACTTTCTGACTGTCCAAATGGGACCCAAGA
GTCCGGGATGCGAGCACGAGCGCCATATTTACTTCATCCTTGGAAAGGTA
CCAGAAATTCTAGCCTACGACATCCTGGAGCAGACGTGGCACCGCCTATC
CTTGGAGAGCAATAAGTACGAGAATATGAATCAATCGTTTCCCATCAAGC
CAGTGGATTTCATCTTCGGAATTCAAGGGGAACTCATACTCTCCGACCAG
GATGGTGATCTATACAGTACGGTGGACAGACTGGAAATTGAAGGCAAAAG
CGAATTAGCAAGCAAACCAATTAACAATAGCATTAAACTCACACATTTGG
GCAGTCTTCTGGGCAGCAGTCGCAGCATGATCATCGACAATTTCGGAACA
TTGTACTATGTTATCCCCAAATTCGGAGCTGTCGTACGATGTGCCAAACT
AGCCAACATCACAGCCGAGGGCAACGAAATCATATATATCACATCGAAGA
ACATTCAGCAGATTTTCTTCACCTCCAATGATGCATTATGGGTCCTAAGT
GATCGGGTCTTGAATGCGAAGGACATGTGCTTTCCTAGCTTATAAAAGCT
TTCTAGACCAT
BS24552.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:28:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
yellow-k-RA | 1029 | CG7463-PA | 1..1029 | 17..1045 | 5145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:28:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
yellow-k-RA | 1034 | CG7463-RA | 1..1029 | 17..1045 | 5145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:28:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15520620..15521648 | 17..1045 | 5145 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 15:28:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\BuT5 | 669 | Dbuz\BuT5 BUT5 669bp | 563..617 | 675..621 | 113 | 67.3 | Minus |
BS24552.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-21 17:07:42 Download gff for
BS24552.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
yellow-k-RA | 1..1027 | 17..1043 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:31 Download gff for
BS24552.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
yellow-k-RA | 1..1027 | 17..1043 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:55 Download gff for
BS24552.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
yellow-k-RA | 1..1027 | 17..1043 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:55 Download gff for
BS24552.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15520620..15521646 | 17..1043 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:31 Download gff for
BS24552.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15513720..15514746 | 17..1043 | 100 | | Plus |
BS24552.pep Sequence
Translation from 16 to 1044
> BS24552.pep
MVTHGVLGLGFLIVGLILATDAWLLSESGLNESSYKVRHLSMHFSRVFLS
VNVESNDAPTLIEAQWPVSYFPMPTVVFPHIDVHSMGDHDDCSLVQQAHW
SQVDALSRLWVMDIGFPGSTCSPRLFVFDLMRNNAELLRIDCGHHIGAND
THFLTVQMGPKSPGCEHERHIYFILGKVPEILAYDILEQTWHRLSLESNK
YENMNQSFPIKPVDFIFGIQGELILSDQDGDLYSTVDRLEIEGKSELASK
PINNSIKLTHLGSLLGSSRSMIIDNFGTLYYVIPKFGAVVRCAKLANITA
EGNEIIYITSKNIQQIFFTSNDALWVLSDRVLNAKDMCFPSL*
BS24552.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:34:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
yellow-k-PA | 342 | CG7463-PA | 1..342 | 1..342 | 1800 | 100 | Plus |