BS24555.complete Sequence
861 bp assembled on 2011-06-17
GenBank Submission: KX805596
> BS24555.complete
GAAGTTATCAGTCGACATGCTAAAATCCGCAAGTGCTTTGCTATGTGGTC
TTCTTGCTTTAAATTTGTATGGAGCTTGGGCAGAATCCGATGTGATTTGT
CCTTTAAAGGACCCTCCTAGTCAATGTGGAGGATTCTGTCTGGGTGTACT
TACGCCCGTGTTAAATCACCTGACCATTTCCCAAAATCTGGCGAATTCCA
ATAATTCAAGCAAGGCTAACGAGGTCCTGGTGAGACAGTACACGATGGAA
GGCCAACTGACTGCTCTGCAGAATAAGCAACTAAGCATTGAAGTCGCACT
GGATGCCCAAGGCAGAAAACTGAATGTTAACGAACAGAACTTTACTGAAC
GACTGAATTGCATGGAAGGCATACTGTCGGCCCTGGAGAAAACAGTCCTT
GAAGTAAAAACCAAAATAAAATACCTCGGATTCGAGCAAATCGGCTCAAA
GTACTATTACATAGAGAAAGTATCCGAGAAGAACTGGTCCACTGCTTCAA
AAACTTGTCGCAATATGGGAGGGCACCTGGCCGACATTAAGGACGAGGCA
GATCTAGCCGCCATCAAGGCGAATCTCAAGGAGGACACGCATTACTGGCT
GGGAATCAATGACTTGGACCACGAGGGAAAATTCTTGTCCATGCCCACGG
GCAAGCAGACTACCTTTTTGAAATGGGCCTCGGGGAGACCCTCTCAGTTG
GACACCCTCAACTGCGTGTTCCTATACAACGGGGAAATGTACGATTACCC
ATGCCACTATACTTTCCGGTTCATTTGCCAGACCGAGGAGGAAGATTTAA
ATGTATGAAAGCTTTCTAGACACAATTCGATTGGGCGGCCGCGAGAACGC
GGGGGGGGGGT
BS24555.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:40:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-22C-RB | 792 | CG42295-PB | 1..792 | 17..808 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:40:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-22C-RB | 857 | CG42295-RB | 19..810 | 17..808 | 3960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:40:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2036456..2037247 | 808..17 | 3960 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:40:17 has no hits.
BS24555.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:46:57 Download gff for
BS24555.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-22C-RB | 1..792 | 17..808 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:02 Download gff for
BS24555.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-22C-RB | 19..813 | 17..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:57:52 Download gff for
BS24555.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-22C-RB | 19..813 | 17..815 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:57:52 Download gff for
BS24555.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2036453..2037247 | 17..815 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:02 Download gff for
BS24555.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2036453..2037247 | 17..815 | 99 | | Minus |
BS24555.pep Sequence
Translation from 16 to 807
> BS24555.pep
MLKSASALLCGLLALNLYGAWAESDVICPLKDPPSQCGGFCLGVLTPVLN
HLTISQNLANSNNSSKANEVLVRQYTMEGQLTALQNKQLSIEVALDAQGR
KLNVNEQNFTERLNCMEGILSALEKTVLEVKTKIKYLGFEQIGSKYYYIE
KVSEKNWSTASKTCRNMGGHLADIKDEADLAAIKANLKEDTHYWLGINDL
DHEGKFLSMPTGKQTTFLKWASGRPSQLDTLNCVFLYNGEMYDYPCHYTF
RFICQTEEEDLNV*
BS24555.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:14:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-22C-PB | 263 | CG42295-PB | 1..263 | 1..263 | 1389 | 100 | Plus |
| CG15358-PC | 229 | CG15358-PC | 4..229 | 27..262 | 378 | 35 | Plus |
| CG15358-PB | 229 | CG15358-PB | 4..229 | 27..262 | 378 | 35 | Plus |
| lectin-28C-PC | 265 | CG7106-PC | 30..263 | 26..258 | 361 | 34.3 | Plus |
| lectin-28C-PB | 265 | CG7106-PB | 30..263 | 26..258 | 361 | 34.3 | Plus |
