BS24557.complete Sequence
665 bp assembled on 2011-06-17
GenBank Submission: KX802757
> BS24557.complete
GAAGTTATCAGTCGACATGTTGAACATATTTGTGTGGTTATCACTTTCGT
TGATTAGTCTGTCCTGGGCACAAGGATCGCGTTATTTACCACCACCGAAT
CCGGCCATGGAACCCATCATAACCAAGCAGTTTTACAGCATATCACCCGC
CGAAGATCCTGAGGATCTGGAGCCAAGAACGAAACACTTGGTGATCGGAC
AGCCACGCAGGAATTACCGAGTGATTTTCATCCGCGCTCCAACGGGAAAC
AGCGAGCATGTGAAATATACGGCGGAGTTGGCACCTCAGGAGGAGCGAAC
TGTGATCTATGTGCTGACCCGGAAGCAACAGGAATTGGAGGCCGCCGATA
TTATGGCACCGCAGCAGAAGTCTCAAGTCGAACAGAAGCCGGATGTATTC
TTCATCAAGTACAAAACCAACGATGAGGCAGCGGCTGCCCAAAGGGAAAT
CCAAACGCAATACGATCAACTTGGTGGAAATACGGAAATCGCAGCGCCCT
ATGTGGCGCCCATTAAATCGGTGATTGGAGCACTTAGTAGCCCCCAATAT
CCAGCAGCTCCATATCCAGTTCAAAGACAATCTCCTGGCTATCACTATGA
TAGGCCCGATAGGTCCACAATCTTGGCGCCAGTGGAACGAACTAACTGAA
AGCTTTCTAGACCAT
BS24557.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:40:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlZ-RB | 633 | CG32569-PB | 1..633 | 17..649 | 3165 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:40:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlZ-RB | 691 | CG32569-RB | 1..634 | 17..650 | 3170 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:40:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16738178..16738811 | 17..650 | 3170 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:40:26 has no hits.
BS24557.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:46:58 Download gff for
BS24557.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlZ-RB | 6..632 | 22..648 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:06 Download gff for
BS24557.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlZ-RB | 6..632 | 22..648 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:57:56 Download gff for
BS24557.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlZ-RB | 6..632 | 22..648 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:57:56 Download gff for
BS24557.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16738183..16738809 | 22..648 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:06 Download gff for
BS24557.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16632216..16632842 | 22..648 | 100 | | Plus |
BS24557.pep Sequence
Translation from 16 to 648
> BS24557.pep
MLNIFVWLSLSLISLSWAQGSRYLPPPNPAMEPIITKQFYSISPAEDPED
LEPRTKHLVIGQPRRNYRVIFIRAPTGNSEHVKYTAELAPQEERTVIYVL
TRKQQELEAADIMAPQQKSQVEQKPDVFFIKYKTNDEAAAAQREIQTQYD
QLGGNTEIAAPYVAPIKSVIGALSSPQYPAAPYPVQRQSPGYHYDRPDRS
TILAPVERTN*
BS24557.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:14:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlZ-PB | 210 | CG32569-PB | 1..210 | 1..210 | 1090 | 100 | Plus |
| TwdlY-PA | 247 | CG32570-PA | 63..213 | 20..173 | 425 | 53.9 | Plus |
| Twdlalpha-PA | 388 | CG32574-PA | 170..316 | 32..181 | 374 | 51.3 | Plus |
| TwdlG-PC | 278 | CG14643-PC | 107..252 | 29..175 | 317 | 46.4 | Plus |
| TwdlG-PB | 278 | CG14643-PB | 107..252 | 29..175 | 317 | 46.4 | Plus |
