BS24559.complete Sequence
1202 bp assembled on 2011-06-17
GenBank Submission: KX805210
> BS24559.complete
GAAGTTATCAGTCGACATGAAGATCTACCAGGATATATATCCTATATCCA
AGCCCTCGCAGATCTTTGCTATATTACCATTCTATAGTGGAGACGTCGAT
GATGGCTTTCGCTTTGGAGGATTGGGTCGCTGGTACGGACGACTGGTGGC
CCTGATTATACTAATCGGATCACTGACATTGGGGGAAGATGTGCTCTTCG
CCTCCAAGGAGTACAGATTGGTGGCCAGTGCCCAAGGTGATACCGAGGAG
ATCAACAGGACCATCGAGACGCTTCTGTGTATCATCAGCTATACCATGGT
GGTATTATCGAGTGTGCAGAATGCATCCAGACACTTTCGCACTCTTCACG
ATATTGCCAAAATCGATGAGTATCTGCTGGCCAATGGATTCCGGGAAACC
TACAGTTGTCGCAATCTGACCATTCTGGTCACCTCTGCAGCAGGCGGTGT
CCTCGCTGTGGCCTTCTACTATATTCACTATCGAAGTGGCATTGGTGCCA
AAAGGCAAATCATCCTGCTTCTGATCTACTTCCTCCAACTGCTGTACTCC
ACTCTCCTGGCCTTATATCTAAGGACACTCATGATGAATTTGGCACAGAG
AATTGGATTTCTTAACCAGAAACTGGATACGTTTAATCTTCAGGATTGTG
GCCACATGGAAAACTGGCGTGAGTTGAGCAACCTCATAGAGGTCCTTTGC
AAATTCCGCTACATCACCGAGAATATTAACTGCGTGGCCGGAGTTTCATT
GCTATTCTACTTTGGCTTCTCCTTCTACACGGTCACAAATCAGAGTTACT
TGGCCTTTGCCACATTGACAGCCGGCTCGTTGAGTTCCAAAACAGAAGTG
GCTGATACCATAGGACTATCATGTATCTGGGTTTTGGCTGAAACTATCAC
AATGATTGTGATTTGCAGCGCATGTGACGGCCTGGCATCCGAGGTGAATG
GCACGGCACAGATCCTGGCGAGAATTTACGGCAAGAGCAAGCAGTTCCAG
AACCTCATCGACAAGTTCCTAACGAAGAGCATCAAACAGGATCTTCAGTT
CACCGCCTACGGATTCTTTTCCATAGACAACTCAACACTCTTCAAGATCT
TCTCGGCTGTTACTACCTATCTGGTGATTCTCATTCAATTCAAGCAGTTG
GAGGACTCCAAGGTGGAAGACATTAGTCAGGCATAAAAGCTTTCTAGACC
AT
BS24559.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:39:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gr68a-RA | 1170 | CG7303-PA | 1..1170 | 17..1186 | 5850 | 100 | Plus |
| Gr32a-RA | 1386 | CG14916-PA | 1192..1352 | 998..1158 | 265 | 77.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:39:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gr68a-RA | 1170 | CG7303-RA | 1..1170 | 17..1186 | 5850 | 100 | Plus |
| Gr32a-RA | 1623 | CG14916-RA | 1361..1521 | 998..1158 | 265 | 77.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:39:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11751300..11752478 | 12..1190 | 5865 | 99.8 | Plus |
| 2L | 23513712 | 2L | 11115502..11115585 | 1013..1096 | 195 | 82.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:39:51 has no hits.
BS24559.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:46:53 Download gff for
BS24559.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gr68a-RA | 1..1168 | 17..1184 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:52 Download gff for
BS24559.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gr68a-RA | 1..1168 | 17..1184 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:57:44 Download gff for
BS24559.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gr68a-RA | 1..1168 | 17..1184 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:57:44 Download gff for
BS24559.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11751305..11752472 | 17..1184 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:52 Download gff for
BS24559.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11744405..11745572 | 17..1184 | 100 | | Plus |
BS24559.pep Sequence
Translation from 16 to 1185
> BS24559.pep
MKIYQDIYPISKPSQIFAILPFYSGDVDDGFRFGGLGRWYGRLVALIILI
GSLTLGEDVLFASKEYRLVASAQGDTEEINRTIETLLCIISYTMVVLSSV
QNASRHFRTLHDIAKIDEYLLANGFRETYSCRNLTILVTSAAGGVLAVAF
YYIHYRSGIGAKRQIILLLIYFLQLLYSTLLALYLRTLMMNLAQRIGFLN
QKLDTFNLQDCGHMENWRELSNLIEVLCKFRYITENINCVAGVSLLFYFG
FSFYTVTNQSYLAFATLTAGSLSSKTEVADTIGLSCIWVLAETITMIVIC
SACDGLASEVNGTAQILARIYGKSKQFQNLIDKFLTKSIKQDLQFTAYGF
FSIDNSTLFKIFSAVTTYLVILIQFKQLEDSKVEDISQA*
BS24559.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:13:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gr68a-PA | 389 | CG7303-PA | 1..389 | 1..389 | 1966 | 100 | Plus |
| Gr32a-PA | 461 | CG14916-PA | 124..455 | 75..385 | 471 | 38.3 | Plus |
| Gr39a-PA | 371 | CG31622-PA | 103..364 | 111..381 | 225 | 26.5 | Plus |
| Gr39a-PD | 381 | CG31622-PD | 147..374 | 150..381 | 220 | 26.7 | Plus |
| Gr39a-PC | 381 | CG31622-PC | 224..374 | 219..381 | 199 | 31.3 | Plus |
