Clone BS24563 Report

Search the DGRC for BS24563

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:245
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptTeh3-RA
Protein status:BS24563.pep: full length peptide match
Sequenced Size:1379

Clone Sequence Records

BS24563.complete Sequence

1379 bp assembled on 2011-06-17

GenBank Submission: KX801721

> BS24563.complete
GAAGTTATCAGTCGACATGGGCAAGAAAAAGGTGCCCGTTGAGGACCTGG
TGGTTCCACCGCAGGACACGCGAATATGCGGCACCATATGCATCTGCCAG
ATGACCCTGGTGCTCAGCTCGGTGGCTCTCGTCTACCTCACGGTGGCCAT
ATATATGCCCTCAACCAGGGCCTTCAAAAGTGGCATCGATCCCACGCCGG
TGATGTGCACCACCACGCGGGCGGTGAACAAGGACAACTGCGAGTGGGGC
AGTTGTGGCGAGTGGTGTCTGAGCAAGACTTCCGGAGCCTGCATCCAGAT
CTATGTGAATCTGCGCAGCAATGGCAGCAATCTCATATTCCAGAACTGCA
CCAACTCGGCCAATAAAACGTGCTACGGGATCGACCAGGATCGCGCGGAC
AAGGCCAGGTGCATCAATGATGAGTGCAAGAATCTCACGGGCACCTTCAA
TTGCACCGCTGGCCAGTGTCTGAACATCACGGATGCCTTCGAGTGCATCT
TCCACAACAGTGATGCACCAGTCAAGTGTTCCGGCAGGCGGGGAAAGATC
AACTGCATGGACATCAGCGGGCTGTACTCCTGCAGTCGAGGAACGTGCCG
GAAGATCCGTACTCCCTATAACTGTGACCGAAGGTGCGTGGACATCCCAA
CACGGAACAAGAACGTGGTGGTCCTCAGCGGGGACAAGGTCTACCTGTCG
CAGTGCCAGAATGCCATCAATGCCGAAACTCTGGAGGAGGTGTGGAACGA
GTCAAGCGAAAATGTAGCAATGACATCGTGTTACTTCATCAGGCACACCT
CGGACCAGGTGGATGCGGTGGACTGCATCAATGGCTCCACGCTGGAGACC
AATATGCTCAGCGATCTGACCAACTTCACATATCTGAGCCACCTGCACGT
GTCGGTGGCCACTCCAGTGCCGGAAATAGCACCACCCGATGTGGACCTCA
CCATTTCCAACGAGTCCAAGCTGATGATCAATCTGGAGGGGTGTGTGAAC
ACTCTGATGGACGAGTGCAAGGAGTTCCTCAAGGACTTCGGACGCGATGG
CAGCGACCACAATGCCCGGGCCCGCTTCCCGTGCTTCTATTCGCCCGGAA
AGAAGGACGTGGTGGTGGCCCGATTCGACCTGGAGGTCACCTATCGCCAG
TTTGTGTTCGCCTCGGTAGTGCCATCGGTTCTGTTCGTGGTCTCGTGTTC
CATCCTGATCATGTGCCAGACCACCGTCTACGTGGGCGACGATGCCAAGA
TGCGCTTCAAAGGATGTGTGGACACGGAGACGGTCCTGAATAAGAACAAC
GTGGGCGCACCCACCAACGGCGACATGGGCGGGGGCGGCGGCGATGAGGT
TATGGCCCTATGAAAGCTTTCTAGACCAT

BS24563.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:40:43
Subject Length Description Subject Range Query Range Score Percent Strand
Teh3-RA 1347 CG18676-PA 1..1347 17..1363 6735 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:40:44
Subject Length Description Subject Range Query Range Score Percent Strand
Teh3-RA 1586 CG18676-RA 1..1347 17..1363 6735 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:40:41
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4183317..4184663 1363..17 6735 100 Minus
Blast to na_te.dros performed on 2014-11-26 14:40:42 has no hits.

BS24563.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:01 Download gff for BS24563.complete
Subject Subject Range Query Range Percent Splice Strand
Teh3-RA 1..1346 17..1362 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:15 Download gff for BS24563.complete
Subject Subject Range Query Range Percent Splice Strand
Teh3-RA 1..1346 17..1362 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:02 Download gff for BS24563.complete
Subject Subject Range Query Range Percent Splice Strand
Teh3-RA 1..1346 17..1362 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:02 Download gff for BS24563.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4183318..4184663 17..1362 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:15 Download gff for BS24563.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4183318..4184663 17..1362 100   Minus

BS24563.pep Sequence

Translation from 16 to 1362

> BS24563.pep
MGKKKVPVEDLVVPPQDTRICGTICICQMTLVLSSVALVYLTVAIYMPST
RAFKSGIDPTPVMCTTTRAVNKDNCEWGSCGEWCLSKTSGACIQIYVNLR
SNGSNLIFQNCTNSANKTCYGIDQDRADKARCINDECKNLTGTFNCTAGQ
CLNITDAFECIFHNSDAPVKCSGRRGKINCMDISGLYSCSRGTCRKIRTP
YNCDRRCVDIPTRNKNVVVLSGDKVYLSQCQNAINAETLEEVWNESSENV
AMTSCYFIRHTSDQVDAVDCINGSTLETNMLSDLTNFTYLSHLHVSVATP
VPEIAPPDVDLTISNESKLMINLEGCVNTLMDECKEFLKDFGRDGSDHNA
RARFPCFYSPGKKDVVVARFDLEVTYRQFVFASVVPSVLFVVSCSILIMC
QTTVYVGDDAKMRFKGCVDTETVLNKNNVGAPTNGDMGGGGGDEVMAL*

BS24563.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:15:55
Subject Length Description Subject Range Query Range Score Percent Strand
Teh3-PA 448 CG18676-PA 1..448 1..448 2407 100 Plus
Teh4-PB 524 CG15003-PB 1..423 1..413 820 39.5 Plus