BS24565.complete Sequence
686 bp assembled on 2011-06-21
GenBank Submission: KX804217
> BS24565.complete
GAAGTTATCAGTCGACATGTACTTCCTTAATCTTTGCCTGATTTGTACCA
CCATCGGTTTGGCCGTCGGTTCACCAACCTTGGAGTACGGTCCCCCACCA
ACTTCGGATACGATCAGTCAGTATCACCACCAGGATGAGCATGGCCAGTA
CGCCTATGGTTACATGGCACCACTGTATTCCAAGCACGAGACCCGCACCG
TGGATGGTGTGATCCGGGGTACCTTCTCCCACATCGATGCAAATGGCGAA
ACCCAGACCGTGGACTATGTGGCCGATGCCGAGGGCTTCCATGTAACCTC
CAATCTGCCCAATCAGCAGGCCAATCAGGAAACCCCTGAAGTGGCTGCAC
TGCGAACACAGCATCTGGAGGCCCATAACCAGGCCAAATTGAGGTTGGCC
GGAGACTACTCCGTGGGTCCACAGCCTGTTCGGGACACTCCCGAGGTGGC
CGCCGCTAAGGTTGCATTCTTCAAGCGTTTCGAAGCCGAGAAGCTGCGCA
ACAAGTTGCTCGCCGAGAAGAAAGTTCTGGTGATACCGAATCCAACTCCC
ATCGCTGTTCGTTCACAGCCGATATATGTCTACCAGCCCACCACCACAGG
ATTCGTGTACAACTACCACACCAAGACGCAGGCCCAAGTTCCATCGAGGA
ACTACCTGCCAGTAGTCTAAAAGCTTTCTAGACCAT
BS24565.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:22:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr72Eb-RA | 654 | CG12255-PA | 1..654 | 17..670 | 3270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:22:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr72Eb-RA | 809 | CG12255-RA | 99..752 | 17..670 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:22:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16364997..16365650 | 17..670 | 3270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:22:37 has no hits.
BS24565.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-21 12:13:14 Download gff for
BS24565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr72Eb-RA | 1..652 | 17..668 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:58 Download gff for
BS24565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr72Eb-RA | 99..750 | 17..668 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:11:56 Download gff for
BS24565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr72Eb-RA | 99..750 | 17..668 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:11:56 Download gff for
BS24565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16364997..16365648 | 17..668 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:58 Download gff for
BS24565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16358097..16358748 | 17..668 | 100 | | Plus |
BS24565.pep Sequence
Translation from 16 to 669
> BS24565.pep
MYFLNLCLICTTIGLAVGSPTLEYGPPPTSDTISQYHHQDEHGQYAYGYM
APLYSKHETRTVDGVIRGTFSHIDANGETQTVDYVADAEGFHVTSNLPNQ
QANQETPEVAALRTQHLEAHNQAKLRLAGDYSVGPQPVRDTPEVAAAKVA
FFKRFEAEKLRNKLLAEKKVLVIPNPTPIAVRSQPIYVYQPTTTGFVYNY
HTKTQAQVPSRNYLPVV*
BS24565.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:33:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr72Eb-PA | 217 | CG12255-PA | 1..217 | 1..217 | 1147 | 100 | Plus |
| Cpr72Ea-PA | 341 | CG4818-PA | 36..147 | 32..138 | 216 | 43.8 | Plus |
| Cpr92F-PA | 381 | CG5494-PA | 25..143 | 34..150 | 167 | 39 | Plus |
