BS24570.complete Sequence
692 bp assembled on 2011-06-17
GenBank Submission: KX805184
> BS24570.complete
GAAGTTATCAGTCGACATGGATTCATCTCGCCTGATTATCTGCCTCCTAA
CTTTTCTGTTGTTTCAAACGGGAAAAGGGTTGGGGAACGGCAGTTATCTG
GAGCTCAGATTGGATGCAGCTGCTGAATCCTGTCCAGATGATTACTACTT
TAACGAAACTATCCAAGCCTGCGTATCTACAGACACTACCAGCTGTACCA
ATCACCAAATCGGCAAATGTCCGATGGCCACAGAAATGGACGAGTTTTGC
GTGTGCAAAGATAAGCACCTTCAGATCTGGAAATGCCCTGAAGGAACCTA
CTTCGATGCCAACCGATTGGTCTGCCGGGTGGGAAGCGTTGAGTGCCAGG
ACGATTATACTCCATCCCCATGTCCTAACAGCACGGCAAGCGATGTCTTC
TGCCTCTGCATCGATGGCAAATGGCATCTTAACTACTGTCCAACGGGCTT
TACCTTTGATGACGAGCTGCAGATTTGCCTGAACACAGGATCTGATGACG
ACGAGTTGCCCAGTTCGTCTGGAAAGTGCCAGCGGCTTGGATTGTTTGGT
GATCCCGCTGACTGCTCTGGGTACTATCATTGTCGCGAAAAGGGCAGTGA
TATTGAGTATTTCAGATGCTCGGTAGGAACCATCTTCAATCTAATTTCCT
TTGCGTGCGTTACTGGAACTTGTTGAAAGCTTTCTAGACCAT
BS24570.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:40:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-I-RA | 660 | CG32304-PA | 1..660 | 17..676 | 3300 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:40:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-I-RA | 733 | CG32304-RA | 11..672 | 15..676 | 3310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:40:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2267868..2268529 | 15..676 | 3310 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:40:29 has no hits.
BS24570.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:46:59 Download gff for
BS24570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-I-RA | 1..659 | 17..675 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:08 Download gff for
BS24570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-I-RA | 1..659 | 17..675 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:57:58 Download gff for
BS24570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-I-RA | 13..671 | 17..675 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:57:58 Download gff for
BS24570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2267870..2268528 | 17..675 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:08 Download gff for
BS24570.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2267870..2268528 | 17..675 | 100 | | Plus |
BS24570.pep Sequence
Translation from 16 to 675
> BS24570.pep
MDSSRLIICLLTFLLFQTGKGLGNGSYLELRLDAAAESCPDDYYFNETIQ
ACVSTDTTSCTNHQIGKCPMATEMDEFCVCKDKHLQIWKCPEGTYFDANR
LVCRVGSVECQDDYTPSPCPNSTASDVFCLCIDGKWHLNYCPTGFTFDDE
LQICLNTGSDDDELPSSSGKCQRLGLFGDPADCSGYYHCREKGSDIEYFR
CSVGTIFNLISFACVTGTC*
BS24570.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:14:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-I-PA | 219 | CG32304-PA | 1..219 | 1..219 | 1232 | 100 | Plus |
| CG32302-PA | 313 | CG32302-PA | 195..308 | 38..154 | 177 | 31.6 | Plus |
| CG17826-PA | 751 | CG17826-PA | 109..286 | 38..215 | 153 | 25.4 | Plus |
| CG43896-PB | 1324 | CG43896-PB | 178..382 | 33..208 | 148 | 24.5 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 178..382 | 33..208 | 148 | 24.5 | Plus |
