BS24574.complete Sequence
329 bp assembled on 2011-06-17
GenBank Submission: KX805139
> BS24574.complete
GAAGTTATCAGTCGACATGCGGTATCTGTGCGTTTTTTCCTTAACACTTA
TCCTTTGCTGCCTTTCAATAAAGGCTCAGAGCTTAAATTGCACCAGGCTT
CGAGAAAATTGTCGTCCTTGCACCCGCCGCTTGGTGGATCCTATTAACGA
CCTGGAATTCATTAATAGCGATTGTAGGGAGAAACTTAGAGGACGTTGGA
TTTGGCGGGATGTAAGGCGTTGTGATATGCAAATTGTTGCGTGCGAAAAT
CATGAAACCCGACTGGATTGCGAGAATGTGGCTAGACTAACAGGCATGAG
ACGGATTCGTTGAAAGCTTTCTAGACCAT
BS24574.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:41:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ej-RA | 297 | CG7588-PA | 1..297 | 17..313 | 1485 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:41:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ej-RA | 403 | CG7588-RA | 13..309 | 17..313 | 1485 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:41:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15660772..15661003 | 248..17 | 1160 | 100 | Minus |
3L | 28110227 | 3L | 15660643..15660707 | 313..249 | 325 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:41:13 has no hits.
BS24574.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:04 Download gff for
BS24574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ej-RA | 13..308 | 17..312 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:27 Download gff for
BS24574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ej-RA | 13..308 | 17..312 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:13 Download gff for
BS24574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Eig71Ej-RA | 13..308 | 17..312 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:13 Download gff for
BS24574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15660644..15660707 | 249..312 | 100 | <- | Minus |
3L | 15660772..15661003 | 17..248 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:27 Download gff for
BS24574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15653744..15653807 | 249..312 | 100 | <- | Minus |
arm_3L | 15653872..15654103 | 17..248 | 100 | | Minus |
BS24574.pep Sequence
Translation from 16 to 312
> BS24574.pep
MRYLCVFSLTLILCCLSIKAQSLNCTRLRENCRPCTRRLVDPINDLEFIN
SDCREKLRGRWIWRDVRRCDMQIVACENHETRLDCENVARLTGMRRIR*
BS24574.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:17:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Eig71Ej-PA | 98 | CG7588-PA | 1..98 | 1..98 | 536 | 100 | Plus |
Eig71Ef-PA | 98 | CG7599-PA | 1..96 | 1..96 | 272 | 47.9 | Plus |
Eig71Eh-PB | 101 | CG7594-PB | 9..95 | 11..97 | 194 | 35.6 | Plus |
Eig71Ed-PA | 99 | CG7350-PA | 1..98 | 1..97 | 163 | 32.7 | Plus |
Eig71Ea-PA | 100 | CG16931-PA | 1..99 | 1..98 | 159 | 31.3 | Plus |