BS24578.complete Sequence
994 bp assembled on 2011-06-17
GenBank Submission: KX800320
> BS24578.complete
GAAGTTATCAGTCGACATGCTGCTGTGTCGCGTTGTGCTGGCACTGCTGC
TGCTGGTGCTACTCCACTACTGCCAGGCGAAGGATGAAGGTGAAACCACA
CAGCGTGGAGCAGTGCTGGTCTCACTGACTGAGAACATGGCCAAATCGGC
AGGATCGCAGCTCGTCCAAGCCGATCCCTTCATCTCGCGCAACCAGAAGC
AGTGCTTTGAGACCCGCAGTCTGGTGTCCTGCATCAAGTACAAGACCAGC
AAATTGATCTGGAAACTGGCCACTAACAGCATGGGCTTCTTCCCCAGCGA
GTACGGGCGCGATCTGGCCGGGGACAGAGGCCGCTGGCTGAGATTAGTCC
AGTTGGGCGAGCCCGCCGATGAGGTGGTCGTGTTCAACGACGCTAAGAGC
TTAGAAGGTGACAGTGAACTGACGATGATTCTCAAGTTCCTGAAAAGGGC
AATGGAGACGTTTGGGCGAAACCACGGACTCCAACTGAGGCTGAACAGCG
AGGGTGGAGCGAGAGTCATGGAGGAATCGGAAGCACGATTGAAGCGCAAG
AAGAAGAAGTGGCTCATTATCCTGCCCCTCGTCATTCTGATGAAGATTGC
CCACCTGAAGATGACTTTGGTGAGCATGCTGATGGGCGTGCTCGGCATGA
ACGTGCTGCTGGTCGGCGGCGTGGGCTGGCTGATCCACTACCTTAAGTAC
AAGACCATGTGCAAGATCCACCCGCATCTGGTGCAGACGCACTCGCACGT
CTACGAGTCAGATCCCTCGGACTACTCCCAGTTCGTGGGCAGCGGTAGCT
ACTCCAACTCGTACTCCCCGTACAGCTCCGGATCGGGGGCTCCTCACGAG
TTGGGCGGCAATAGCTACAGCAAGGACTGGGCCACGAGTAAGGCCTACAA
CGCGCACAACTATCTTGACACGATCAGCAAGCGGATACAGTAGAAGCTTT
CTAGACCTATTCGTGTGGCGCGGCGAGGCGGGGCGAAGGGTTTA
BS24578.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:41:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi1-RA | 927 | CG15585-PA | 1..927 | 17..943 | 4635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:41:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi1-RA | 1161 | CG15585-RA | 95..1024 | 15..944 | 4650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:41:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6174420..6174834 | 530..944 | 2075 | 100 | Plus |
| 3R | 32079331 | 3R | 6173643..6174038 | 15..410 | 1980 | 100 | Plus |
| 3R | 32079331 | 3R | 6174233..6174359 | 404..530 | 635 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:41:32 has no hits.
BS24578.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:06 Download gff for
BS24578.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi1-RA | 1..927 | 17..943 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:34 Download gff for
BS24578.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi1-RA | 97..1024 | 17..944 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:21 Download gff for
BS24578.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi1-RA | 97..1024 | 17..944 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:21 Download gff for
BS24578.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6173645..6174035 | 17..407 | 100 | -> | Plus |
| 3R | 6174237..6174359 | 408..530 | 100 | -> | Plus |
| 3R | 6174421..6174834 | 531..944 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:34 Download gff for
BS24578.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1999367..1999757 | 17..407 | 100 | -> | Plus |
| arm_3R | 1999959..2000081 | 408..530 | 100 | -> | Plus |
| arm_3R | 2000143..2000556 | 531..944 | 100 | | Plus |
BS24578.pep Sequence
Translation from 16 to 942
> BS24578.pep
MLLCRVVLALLLLVLLHYCQAKDEGETTQRGAVLVSLTENMAKSAGSQLV
QADPFISRNQKQCFETRSLVSCIKYKTSKLIWKLATNSMGFFPSEYGRDL
AGDRGRWLRLVQLGEPADEVVVFNDAKSLEGDSELTMILKFLKRAMETFG
RNHGLQLRLNSEGGARVMEESEARLKRKKKKWLIILPLVILMKIAHLKMT
LVSMLMGVLGMNVLLVGGVGWLIHYLKYKTMCKIHPHLVQTHSHVYESDP
SDYSQFVGSGSYSNSYSPYSSGSGAPHELGGNSYSKDWATSKAYNAHNYL
DTISKRIQ*
BS24578.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:17:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi1-PA | 308 | CG15585-PA | 1..308 | 1..308 | 1593 | 100 | Plus |
