BS24583.complete Sequence
551 bp assembled on 2011-06-17
GenBank Submission: KX803284
> BS24583.complete
GAAGTTATCAGTCGACATGAAGTTGACAAAGTTATGGTTGCTTTTTGTGT
GCCTGGGGCTTTTCGTTACCCTGGTTGTGAGTGCCGATACGGACTCGGAT
GCCGATTCGGATTCATCCGCCGATTCGGATTCATCCGCCGATTCCGATGA
GAATACAACCGCATCCGGATCGATAGTAACCTCAACCACGGAGTCCAGTG
CCACGAACAGTTCCGGTTCCTCAGATGATGCTTCTGGCAGTAGTTCCGAT
GTGGACGATGGTTCCGATGATGATACTGATTCTGGATCCGATACGGATTA
TGATACACCTACTACAGCTCCAGTTGTTAAAAAGAGGGCCAATAGGAAGA
AGGCTAACAATAACAAGAAGAGAGCTAGCAACAATAGGAAGAAGGCCAAC
AATAACAACAACAACAAGAAGAGGGCCAACAGCAACAACAATCGCAAAAG
GAGGGCGTCCAACAACAACAATAAAAAGAAGGCATCCAACAACAACAACA
GGCGCAGGAACAACAATTCCAGGAGGCGTGGTTAGAAGCTTTCTAGACCA
T
BS24583.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:41:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pig1-RB | 519 | CG10790-PB | 1..519 | 17..535 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:41:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pig1-RB | 690 | CG10790-RB | 51..576 | 11..536 | 2615 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:41:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3248714..3249239 | 536..11 | 2615 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:41:03 has no hits.
BS24583.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:03 Download gff for
BS24583.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pig1-RB | 57..575 | 17..535 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:22 Download gff for
BS24583.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pig1-RB | 57..575 | 17..535 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:10 Download gff for
BS24583.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pig1-RB | 57..575 | 17..535 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:10 Download gff for
BS24583.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3248715..3249233 | 17..535 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:22 Download gff for
BS24583.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3142748..3143266 | 17..535 | 100 | | Minus |
BS24583.pep Sequence
Translation from 16 to 534
> BS24583.pep
MKLTKLWLLFVCLGLFVTLVVSADTDSDADSDSSADSDSSADSDENTTAS
GSIVTSTTESSATNSSGSSDDASGSSSDVDDGSDDDTDSGSDTDYDTPTT
APVVKKRANRKKANNNKKRASNNRKKANNNNNNKKRANSNNNRKRRASNN
NNKKKASNNNNRRRNNNSRRRG*
BS24583.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:16:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pig1-PB | 172 | CG10790-PB | 1..172 | 1..172 | 874 | 100 | Plus |
| CG17362-PB | 153 | CG17362-PB | 4..152 | 8..166 | 188 | 34.8 | Plus |
| Mur89F-PC | 2158 | CG4090-PC | 285..440 | 22..168 | 165 | 25.6 | Plus |
| Mur89F-PB | 2159 | CG4090-PB | 285..440 | 22..168 | 165 | 25.6 | Plus |
| Mur89F-PC | 2158 | CG4090-PC | 283..429 | 24..168 | 161 | 21.8 | Plus |
| Mur89F-PB | 2159 | CG4090-PB | 283..429 | 24..168 | 161 | 21.8 | Plus |
| Mur89F-PC | 2158 | CG4090-PC | 304..465 | 22..170 | 150 | 23.5 | Plus |
| Mur89F-PB | 2159 | CG4090-PB | 304..465 | 22..170 | 150 | 23.5 | Plus |
| Mur89F-PC | 2158 | CG4090-PC | 343..474 | 22..152 | 149 | 23.5 | Plus |
| Mur89F-PB | 2159 | CG4090-PB | 343..474 | 22..152 | 149 | 23.5 | Plus |
| CG14852-PA | 174 | CG14852-PA | 6..167 | 9..169 | 141 | 26.8 | Plus |
