BS24590.complete Sequence
443 bp assembled on 2011-06-17
GenBank Submission: KX804346
> BS24590.complete
GAAGTTATCAGTCGACATGTTGGACCAACTTACACTGTGTTTGTTGCTAA
ATTTTCTGTGCGCAAATGTTCTCGCTAACACTTCAGTATTTAATCCGTGT
GTTTCGCAAAATGAGTTATCCGAATATGAAGCCCACCAAGTGATGGAGAA
TTGGCCAGTTCCGCCCATCGATCGGGCTTACAAATGCTTTCTAACATGCG
TCCTCTTGGATTTGGGTCTGATTGATGAACGGGGTAATGTGCAGATCGAT
AAGTACATGAAATCCGGAGTGGTGGACTGGCAATGGGTGGCAATAGAGTT
GGTAACATGTCGCATAGAATTCAGCGACGAAAGGGATCTGTGCGAGCTAT
CATATGGAATCTTCAACTGCTTCAAGGATGTGAAGCTTGCGGCCGAGAAG
TATGTTTCAATTAGTAATGCAAAGTAGAAGCTTTCTAGACCAT
BS24590.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:42:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp57e-RA | 411 | CG30145-PA | 1..411 | 17..427 | 2055 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:42:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp57e-RA | 411 | CG30145-RA | 1..411 | 17..427 | 2055 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:42:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20547815..20548169 | 428..74 | 1775 | 100 | Minus |
| 2R | 25286936 | 2R | 20548234..20548291 | 74..17 | 290 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 14:42:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| baggins | 5453 | baggins BAGGINS 5453bp | 3939..3981 | 289..331 | 107 | 72.1 | Plus |
BS24590.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:09 Download gff for
BS24590.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp57e-RA | 6..411 | 22..427 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:49 Download gff for
BS24590.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp57e-RA | 6..411 | 22..427 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:35 Download gff for
BS24590.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp57e-RA | 6..411 | 22..427 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:35 Download gff for
BS24590.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20547816..20548169 | 74..427 | 100 | <- | Minus |
| 2R | 20548235..20548286 | 22..73 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:49 Download gff for
BS24590.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16435321..16435674 | 74..427 | 100 | <- | Minus |
| arm_2R | 16435740..16435791 | 22..73 | 100 | | Minus |
BS24590.pep Sequence
Translation from 16 to 426
> BS24590.pep
MLDQLTLCLLLNFLCANVLANTSVFNPCVSQNELSEYEAHQVMENWPVPP
IDRAYKCFLTCVLLDLGLIDERGNVQIDKYMKSGVVDWQWVAIELVTCRI
EFSDERDLCELSYGIFNCFKDVKLAAEKYVSISNAK*
BS24590.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:18:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp57e-PA | 136 | CG30145-PA | 1..136 | 1..136 | 725 | 100 | Plus |
| Obp57d-PB | 136 | CG30150-PB | 31..129 | 26..120 | 172 | 32.3 | Plus |
