BS24594.complete Sequence
644 bp assembled on 2011-06-17
GenBank Submission: KX804991
> BS24594.complete
GAAGTTATCAGTCGACATGAGAATCATAACAGTCCTGTCTGTTTCGCTCT
TGGTGGGTCTTGTGGCCATAAGCCAGGCAGACGACAGTAGTCCAGGATTC
TTCCTAAAGATCACCAAGAACGTACCGCGGCTGGGCAAGCGAGGCGAGAA
CTTTGCCATAAAGAACCTAAAGACCATTCCTCGCATAGGACGCAGTGAGC
ACAGCTCTGTTACTCCTCTGCTGGCGTGGCTATGGGATTTGGAAACGAGT
CCAAGCAAGCGGCGCTTACCCGCAGGGGAATCCCCAGCGAAGGAGCAGGA
ACTTAACGTGGTGCAGCCCGTCAACTCGAATACGCTCCTTGAGCTGCTTG
ACAACAACGCTATTCCCAGCGAGCAGGTGAAGTTCGTCCACTGGAAGGAT
TTCGATCGTGCCCTCCAGGCAGATGCCGATCTGTACAGCAAGGTTATCCA
GCTGGGACGCCGTCCGGACCAGCACCTCAAGCAGACTCTCAGCTTTGGCA
GCTTCGTTCCCATCTTCGGCGACGAGCAGAATCCGGACTTTATGATGTAC
AAAAACAACGAGGATCAGGAACTTTACGGCGGGGGAAATCGCTACGATCG
CCAATTCCTCAAGTACAACATCCTGTGAAAGCTTTCTAGACCAT
BS24594.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:41:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ETH-RA | 612 | CG18105-PA | 1..612 | 17..628 | 3060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:41:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ETH-RA | 755 | CG18105-RA | 24..636 | 16..628 | 3065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:41:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24794789..24795214 | 628..203 | 2130 | 100 | Minus |
2R | 25286936 | 2R | 24795273..24795459 | 202..16 | 935 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:41:46 has no hits.
BS24594.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:07 Download gff for
BS24594.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ETH-RA | 1..611 | 17..627 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:40 Download gff for
BS24594.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ETH-RA | 25..635 | 17..627 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:25 Download gff for
BS24594.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ETH-RA | 25..635 | 17..627 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:25 Download gff for
BS24594.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24794790..24795214 | 203..627 | 100 | <- | Minus |
2R | 24795273..24795458 | 17..202 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:40 Download gff for
BS24594.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20682313..20682737 | 203..627 | 100 | <- | Minus |
arm_2R | 20682796..20682981 | 17..202 | 100 | | Minus |
BS24594.pep Sequence
Translation from 16 to 627
> BS24594.pep
MRIITVLSVSLLVGLVAISQADDSSPGFFLKITKNVPRLGKRGENFAIKN
LKTIPRIGRSEHSSVTPLLAWLWDLETSPSKRRLPAGESPAKEQELNVVQ
PVNSNTLLELLDNNAIPSEQVKFVHWKDFDRALQADADLYSKVIQLGRRP
DQHLKQTLSFGSFVPIFGDEQNPDFMMYKNNEDQELYGGGNRYDRQFLKY
NIL*
BS24594.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:17:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ETH-PA | 203 | CG18105-PA | 1..203 | 1..203 | 1049 | 100 | Plus |