BS24653.complete Sequence
482 bp assembled on 2011-06-23
GenBank Submission: KX804021
> BS24653.complete
GAAGTTATCAGTCGACATGTCGGCCATCAGCAAGCAGAAGACCCTCAACA
CCATGTACAAATCGAAAGTCTCGCCTTCGCGTCGCCTGAAGAATCTGCTG
AAGCCGCTGCTCGGTCAATTCTTCAACATGAAGAAGGAGCAGCCCAAGAG
GAGCTCCTACATCGCCTCCGAGGAGAAGGAGGCCGAGTTCGAGTGGCTCA
GCAACGATATGGACAACATGGCCAACGAGCATCTGGAGCATCGCCTCATC
GAGGAAATCCGCCAGTGCGCCAAGGAAGATGCCGTCATCGTTTACAATGA
GAACGGATCCGGGGAGCTGCACACCATCGACCAGGAGGATTACTATGTAC
CAGTGCATTTTGCCCGCACCAATGCCGGCACCTTCTTCTGGACATCGGTG
CAACCCAAAGCCTGCGAACCCTATGCCATCGAATGGAACTTCCTGGACCG
TTGGGCTCAAGCTTGAAAGCTTTCTAGACCAT
BS24653.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:48:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ocho-RB | 450 | CG3396-PB | 1..450 | 17..466 | 2250 | 100 | Plus |
| Ocho-RC | 450 | CG3396-PC | 1..450 | 17..466 | 2250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:48:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ocho-RB | 1193 | CG3396-RB | 457..907 | 17..467 | 2255 | 100 | Plus |
| Ocho-RC | 858 | CG3396-RC | 122..572 | 17..467 | 2255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:48:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14975304..14975754 | 17..467 | 2255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:48:14 has no hits.
BS24653.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-23 12:42:47 Download gff for
BS24653.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ocho-RB | 457..905 | 17..465 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:58 Download gff for
BS24653.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ocho-RC | 122..570 | 17..465 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:37 Download gff for
BS24653.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ocho-RC | 122..570 | 17..465 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:37 Download gff for
BS24653.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14975304..14975752 | 17..465 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:58 Download gff for
BS24653.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14968404..14968852 | 17..465 | 100 | | Plus |
BS24653.pep Sequence
Translation from 16 to 465
> BS24653.pep
MSAISKQKTLNTMYKSKVSPSRRLKNLLKPLLGQFFNMKKEQPKRSSYIA
SEEKEAEFEWLSNDMDNMANEHLEHRLIEEIRQCAKEDAVIVYNENGSGE
LHTIDQEDYYVPVHFARTNAGTFFWTSVQPKACEPYAIEWNFLDRWAQA*
BS24653.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:35:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ocho-PB | 149 | CG3396-PB | 1..149 | 1..149 | 793 | 100 | Plus |
| Ocho-PC | 149 | CG3396-PC | 1..149 | 1..149 | 793 | 100 | Plus |
| Tom-PA | 158 | CG5185-PA | 28..158 | 22..149 | 180 | 37 | Plus |
| E(spl)malpha-BFM-PA | 138 | CG8337-PA | 10..138 | 11..149 | 161 | 36.5 | Plus |
