BS24695.complete Sequence
341 bp assembled on 2011-09-14
GenBank Submission: KX804420
> BS24695.complete
GAAGTTATCAGTCGACATGAAATTCGCCATCGTCCTGTTCGCCCTCTTTG
CCGTGGCCCTGGCTGCCCCTACTGTCGAGGTCCTGCGATCGGATAGCAAT
GTTGGAATCGATAACTACTCATATGCAGTTGAAACCAGCGACGGTACCTC
GAAGAGCGAGGAGGGTGTGCTGAAGAACGCCGGCACCGAGCTAGAGGCCA
TCTCAACCCACGGCTCCTTCAGCTACGTGGGCCCTGATGGCCAGACCTAC
ACCGTCACCTACGTGGCCGATGAGAACGGATTCCAGCCCCAGGGTGCTCA
TCTGCCCGTTGCCCCCGTTGCCTAAAAGCTTTCTAGACCAT
BS24695.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:24:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr65Ax1-RA | 309 | CG34270-PA | 1..309 | 17..325 | 1545 | 100 | Plus |
Cpr65Ax2-RB | 309 | CG18777-PB | 1..309 | 17..325 | 1545 | 100 | Plus |
Cpr65Ax2-RA | 309 | CG18777-PA | 1..309 | 17..325 | 1545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:24:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr65Ax1-RA | 389 | CG34270-RA | 49..357 | 17..325 | 1545 | 100 | Plus |
Cpr65Ax2-RB | 732 | CG18777-RB | 48..356 | 17..325 | 1545 | 100 | Plus |
Cpr65Ax2-RA | 388 | CG18777-RA | 48..356 | 17..325 | 1545 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:24:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6147563..6147761 | 325..127 | 995 | 100 | Minus |
3L | 28110227 | 3L | 6150434..6150632 | 325..127 | 995 | 100 | Minus |
3L | 28110227 | 3L | 6147830..6147939 | 126..17 | 550 | 100 | Minus |
3L | 28110227 | 3L | 6150701..6150810 | 126..17 | 550 | 100 | Minus |
3L | 28110227 | 3L | 6133154..6133244 | 325..235 | 335 | 91.2 | Minus |
3L | 28110227 | 3L | 6134835..6134925 | 325..235 | 320 | 90.1 | Minus |
3L | 28110227 | 3L | 6130551..6130641 | 325..235 | 305 | 89 | Minus |
3L | 28110227 | 3L | 6145140..6145289 | 158..307 | 300 | 80 | Plus |
3L | 28110227 | 3L | 6137725..6137830 | 313..208 | 290 | 84.9 | Minus |
3L | 28110227 | 3L | 6136387..6136470 | 318..235 | 270 | 88.1 | Minus |
3L | 28110227 | 3L | 6146961..6147036 | 250..325 | 230 | 86.8 | Plus |
3L | 28110227 | 3L | 6149832..6149907 | 250..325 | 230 | 86.8 | Plus |
3L | 28110227 | 3L | 6139425..6139574 | 307..158 | 225 | 76.7 | Minus |
3L | 28110227 | 3L | 6143800..6143871 | 236..307 | 195 | 84.7 | Plus |
3L | 28110227 | 3L | 6151536..6151619 | 211..294 | 180 | 81 | Plus |
2R | 25286936 | 2R | 12408286..12408333 | 259..306 | 180 | 91.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:24:42 has no hits.
BS24695.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-14 12:05:28 Download gff for
BS24695.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr65Ax1-RA | 46..352 | 17..323 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:14:26 Download gff for
BS24695.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr65Ax1-RA | 49..355 | 17..323 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:10:05 Download gff for
BS24695.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr65Ax2-RA | 48..354 | 17..323 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:10:05 Download gff for
BS24695.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6147565..6147761 | 127..323 | 100 | <- | Minus |
3L | 6147830..6147939 | 17..126 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:14:26 Download gff for
BS24695.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6140665..6140861 | 127..323 | 100 | <- | Minus |
arm_3L | 6140930..6141039 | 17..126 | 100 | | Minus |
BS24695.pep Sequence
Translation from 16 to 324
> BS24695.pep
MKFAIVLFALFAVALAAPTVEVLRSDSNVGIDNYSYAVETSDGTSKSEEG
VLKNAGTELEAISTHGSFSYVGPDGQTYTVTYVADENGFQPQGAHLPVAP
VA*
BS24695.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:16:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr65Ax1-PA | 102 | CG34270-PA | 1..102 | 1..102 | 515 | 100 | Plus |
Cpr65Ax2-PB | 102 | CG18777-PB | 1..102 | 1..102 | 515 | 100 | Plus |
Cpr65Ax2-PA | 102 | CG18777-PA | 1..102 | 1..102 | 515 | 100 | Plus |
Lcp65Ag1-PA | 105 | CG10530-PA | 1..105 | 1..102 | 309 | 60 | Plus |
Lcp65Ag2-PA | 105 | CG10534-PA | 1..105 | 1..102 | 309 | 60 | Plus |