BS24702.complete Sequence
497 bp assembled on 2011-06-17
GenBank Submission: KX803044
> BS24702.complete
GAAGTTATCAGTCGACATGAAACTGTTAATATGGTTGTGCCTCCTCGGCT
TCCTGGCCAGTGCCTATGGCATTTTCCTGGACAAGATTACCGGTCGAGGG
GATTCATCTGGAAACGGCCTACTAGACGATATCTTTGGACTCGAAGACTC
GGATAACAGCAGCCACAACAAAACCTCCCAACATGCATTGCCAGCGTCGG
GAATTTTTACTCCGGTTAAAGTAGCTGTTGACGTTATTCAAAATATATGG
GATGAATTTTCTAAGGGAGTTTTAGGCCTTATGGGCAGTTTTGGTACCGG
TGATGATGGAGGCGAATCACCGCCGTCTGGGAATACAGCGCCTGTCACAA
CAGAGTCTAGTTTGCCATCGCAAGAAACCACAACGACTAGAACAACGCCG
TTTACAACAACGGAATCCAGAACGGAATCGGTCTTGGAAACAACCACAAC
AGATTCATCCACGAGTACTTTGCCGCCATAAAAGCTTTCTAGACCAT
BS24702.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:43:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5402-RA | 465 | CG5402-PA | 1..465 | 17..481 | 2325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:43:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5402-RA | 615 | CG5402-RA | 28..493 | 16..481 | 2330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:43:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27502679..27502929 | 266..16 | 1255 | 100 | Minus |
| 3R | 32079331 | 3R | 27502212..27502429 | 481..264 | 1090 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:43:04 has no hits.
BS24702.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:13 Download gff for
BS24702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5402-RA | 29..491 | 17..479 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:07 Download gff for
BS24702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5402-RA | 29..491 | 17..479 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:54 Download gff for
BS24702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5402-RA | 29..491 | 17..479 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:54 Download gff for
BS24702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27502214..27502427 | 266..479 | 100 | <- | Minus |
| 3R | 27502680..27502928 | 17..265 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:07 Download gff for
BS24702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23327936..23328149 | 266..479 | 100 | <- | Minus |
| arm_3R | 23328402..23328650 | 17..265 | 100 | | Minus |
BS24702.pep Sequence
Translation from 16 to 480
> BS24702.pep
MKLLIWLCLLGFLASAYGIFLDKITGRGDSSGNGLLDDIFGLEDSDNSSH
NKTSQHALPASGIFTPVKVAVDVIQNIWDEFSKGVLGLMGSFGTGDDGGE
SPPSGNTAPVTTESSLPSQETTTTRTTPFTTTESRTESVLETTTTDSSTS
TLPP*
BS24702.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:19:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5402-PA | 154 | CG5402-PA | 1..154 | 1..154 | 795 | 100 | Plus |
