BS24704.complete Sequence
365 bp assembled on 2011-06-21
GenBank Submission: KX805939
> BS24704.complete
GAAGTTATCAGTCGACATGGGCGGACATCACGGCGAACCCTACACGGTGC
CCCACGCATCGACCTACAAGGTGGAGAGTGTGCCCCAACTCGTGGAGGTG
AAGGAGGCTCTGGGCCGCCAGGGATTGAAGGATCCATGGCTGAGGAACGA
AGTCTGGCGCTATGAGCCCAAGGCCTTCGGCACCCACAGATCCCGCCTGA
ACACCTTCCTTTTCCGCGGACTCGGCGTGGGATTCTGCGCTTTCCTGGCC
ACCGTCGCCGTGGAGTACGCGCTGGGCATTGGCAAGGGTCAGGGCGGCCA
TGGACATGGCCACGGTCACGAGGAACACGGAGATAAGGGCCACCATTAGA
AGCTTTCTAGACCAT
BS24704.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:18:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10320-RE | 333 | CG10320-PE | 1..333 | 17..349 | 1665 | 100 | Plus |
CG10320-RD | 333 | CG10320-PD | 1..333 | 17..349 | 1665 | 100 | Plus |
CG10320-RC | 333 | CG10320-PC | 1..333 | 17..349 | 1665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:18:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10320-RE | 405 | CG10320-RE | 40..373 | 17..350 | 1670 | 100 | Plus |
CG10320-RD | 525 | CG10320-RD | 160..493 | 17..350 | 1670 | 100 | Plus |
CG10320-RC | 520 | CG10320-RC | 155..488 | 17..350 | 1670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:18:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21658538..21658745 | 143..350 | 1040 | 100 | Plus |
2R | 25286936 | 2R | 21658353..21658481 | 17..145 | 645 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 15:18:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
invader3 | 5484 | invader3 INVADER3 5484bp | 354..395 | 80..121 | 102 | 71.4 | Plus |
BS24704.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-21 11:27:00 Download gff for
BS24704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10320-RE | 43..375 | 17..349 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:11 Download gff for
BS24704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10320-RC | 155..487 | 17..349 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:42 Download gff for
BS24704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10320-RC | 155..487 | 17..349 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:42 Download gff for
BS24704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21658353..21658480 | 17..144 | 100 | -> | Plus |
2R | 21658540..21658744 | 145..349 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:11 Download gff for
BS24704.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17545858..17545985 | 17..144 | 100 | -> | Plus |
arm_2R | 17546045..17546249 | 145..349 | 100 | | Plus |
BS24704.pep Sequence
Translation from 16 to 348
> BS24704.pep
MGGHHGEPYTVPHASTYKVESVPQLVEVKEALGRQGLKDPWLRNEVWRYE
PKAFGTHRSRLNTFLFRGLGVGFCAFLATVAVEYALGIGKGQGGHGHGHG
HEEHGDKGHH*
BS24704.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:33:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10320-PE | 110 | CG10320-PE | 1..110 | 1..110 | 616 | 100 | Plus |
CG10320-PD | 110 | CG10320-PD | 1..110 | 1..110 | 616 | 100 | Plus |
CG10320-PC | 110 | CG10320-PC | 1..110 | 1..110 | 616 | 100 | Plus |
CG10320-PB | 110 | CG10320-PB | 1..110 | 1..110 | 616 | 100 | Plus |
CG10320-PA | 110 | CG10320-PA | 1..110 | 1..110 | 616 | 100 | Plus |