BS24705.complete Sequence
1042 bp assembled on 2011-06-17
GenBank Submission: KX803566
> BS24705.complete
GAAGTTATCAGTCCACATGATAAGTGCACCAATTCGCTCTATCCTTGCAC
TTACAGCAAAGCGCACGGCGGTTACAAGCGCGGCCAATCAGGTGCGAATT
GTGGAGGTTGGACCGCGGGATGGTCTTCAAAACGAGCCCAAACTCCTGCC
GGCAGCCACCAAGATCGAGCTGATCAACCAATTGTCCGAAACAGGACTGC
GAACCATAGAAGCCACCAGCTTTGTGAGCGCCAAATGGGTGCCACAGATG
GGCGACAATGCCGAAGTGCTGAAAGGAATCCGCAAAGTGACTGGTATAAG
CTATCCAGTCCTCACGCCTAATCTGAAGGGATTCGAGAGTGCTCTGGAGG
CGGGAGCCGAGGAGGTGGCAGTCTTTGGAGCCGCATCTGATGCGTTTTCG
CTGAAGAACGTTAATTGCACGGCAGCTGAGGCCATCGAACGATTTAAACC
TGTGCTGAAAGCAGCCCAAAAGCATGGTGTGCGCGTCCGGGGCTACGTTT
CCACCGTGGTTGGCTGCCCGTACGAGGGTGCTGTTGCGCCGAGTGCTGTC
GTCAAAGTGGTGGAAGCCCTGTACCAAATGGGCTGCTATGAGATCTCATT
GGGCGACACCATTGGTGTGGGCACTCCAGGCACAATGCGCCGAATGCTGG
ATGAGGTGACCAAGGTCGTCCCGGCTAAAGATCTGGCCGTGCACTGCCAC
GACACTTATGGTCAGGCTCTGAGCAACATACTGGTCTCACTGGACTATGG
CATTCGGGTGGTGGACTCTTCCGTTTCTGGCTTGGGCGGATGTCCTTACG
CCAAGGGGGCGTCAGGCAACGCAGCCACCGAGGATGTGGTCTACTTACTG
CACGGCATGGGCCTCGATACTGGCGTCAACCTAGACAAACTGATCCAAGT
GGGGCGGTACATCTGCACCGAACTGGGCAGAACCTCAGAGTCCAAGGTTA
ATCGAGCGTGGAAGGGACCGCAGGCGCGAGTTAAGTGAAAGCTTTCTAGA
CCTATTCGTTTGGCGCGGCTGGGAAGGGGGGGGGGTTTAAAA
BS24705.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:43:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10399-RB | 972 | CG10399-PB | 1..972 | 17..988 | 4860 | 100 | Plus |
| CG10399-RA | 972 | CG10399-PA | 1..972 | 17..988 | 4860 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:43:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10399-RB | 1218 | CG10399-RB | 67..1038 | 17..988 | 4860 | 100 | Plus |
| CG10399-RA | 1120 | CG10399-RA | 67..1038 | 17..988 | 4860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:43:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6960545..6961473 | 60..988 | 4645 | 100 | Plus |
| 2L | 23513712 | 2L | 6960443..6960487 | 17..61 | 225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:43:15 has no hits.
BS24705.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:14 Download gff for
BS24705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10399-RA | 18..989 | 17..988 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:10 Download gff for
BS24705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10399-RA | 67..1038 | 17..988 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:57 Download gff for
BS24705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10399-RA | 67..1038 | 17..988 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:57 Download gff for
BS24705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6960443..6960487 | 17..61 | 100 | -> | Plus |
| 2L | 6960547..6961484 | 62..1001 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:10 Download gff for
BS24705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6960443..6960487 | 17..61 | 100 | -> | Plus |
| arm_2L | 6960547..6961484 | 62..1001 | 99 | <- | Plus |
BS24705.pep Sequence
Translation from 16 to 987
> BS24705.pep
MISAPIRSILALTAKRTAVTSAANQVRIVEVGPRDGLQNEPKLLPAATKI
ELINQLSETGLRTIEATSFVSAKWVPQMGDNAEVLKGIRKVTGISYPVLT
PNLKGFESALEAGAEEVAVFGAASDAFSLKNVNCTAAEAIERFKPVLKAA
QKHGVRVRGYVSTVVGCPYEGAVAPSAVVKVVEALYQMGCYEISLGDTIG
VGTPGTMRRMLDEVTKVVPAKDLAVHCHDTYGQALSNILVSLDYGIRVVD
SSVSGLGGCPYAKGASGNAATEDVVYLLHGMGLDTGVNLDKLIQVGRYIC
TELGRTSESKVNRAWKGPQARVK*
BS24705.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:19:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10399-PB | 323 | CG10399-PB | 1..323 | 1..323 | 1631 | 100 | Plus |
| CG10399-PA | 323 | CG10399-PA | 1..323 | 1..323 | 1631 | 100 | Plus |
