BS24710.complete Sequence
383 bp assembled on 2011-06-17
GenBank Submission: KX803759
> BS24710.complete
GAAGTTATCAGTCGACATGCGTTCCTTCATTCTGATTGCCCTCTTCGCCC
TGATTGCCCTGGCTGCTGCTCAAGGCGGACCACAAGGTGGACAGCAGGGT
GGGCAAGGAGGATCTCAAAATGGTCAGCAAGGAGGCCAGCAGGGAGGCTC
CCAGGAAGGATCCCAGGAAGGATCCCAGGAAGGACAACAGGGAGGTCAGC
AGGGAGGTCAGCAGCAGGGTGGTCCTGGCGGTCCATGGGGTCTGCCTCCG
AATGGAACTGAACTCTCCAACAGTACCACAACTTCGACCACTGAGGCTAC
CAGCACTGAATCCAGCAGCACAGAGGTATCGTCTTCGTAAAAGCTTTCTA
GACCATTCGTTAGGCGCGCGAAAGGGGGGAAGA
BS24710.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:42:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12506-RA | 324 | CG12506-PA | 1..324 | 17..340 | 1590 | 99.4 | Plus |
CG13946-RA | 300 | CG13946-PA | 1..281 | 17..321 | 915 | 88.2 | Plus |
CG13947-RA | 360 | CG13947-PA | 1..86 | 17..102 | 235 | 84.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:42:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12506-RA | 471 | CG12506-RA | 49..372 | 17..340 | 1590 | 99.4 | Plus |
CG13946-RA | 406 | CG13946-RA | 7..287 | 17..321 | 915 | 88.2 | Plus |
CG13947-RA | 483 | CG13947-RA | 32..117 | 17..102 | 235 | 84.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:42:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 773595..773918 | 17..340 | 1590 | 99.4 | Plus |
2L | 23513712 | 2L | 776542..776822 | 17..321 | 915 | 88.2 | Plus |
2L | 23513712 | 2L | 779204..779289 | 17..102 | 235 | 84.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:42:37 has no hits.
BS24710.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:11 Download gff for
BS24710.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12506-RA | 21..347 | 17..346 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:57 Download gff for
BS24710.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12506-RA | 49..375 | 17..346 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:46 Download gff for
BS24710.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12506-RA | 49..375 | 17..346 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:46 Download gff for
BS24710.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 773595..773921 | 17..346 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:57 Download gff for
BS24710.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 773595..773921 | 17..346 | 98 | | Plus |
BS24710.pep Sequence
Translation from 16 to 339
> BS24710.pep
MRSFILIALFALIALAAAQGGPQGGQQGGQGGSQNGQQGGQQGGSQEGSQ
EGSQEGQQGGQQGGQQQGGPGGPWGLPPNGTELSNSTTTSTTEATSTESS
STEVSSS*
BS24710.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:18:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12506-PA | 107 | CG12506-PA | 1..107 | 1..107 | 550 | 100 | Plus |
CG13946-PA | 99 | CG13946-PA | 1..99 | 1..107 | 465 | 86 | Plus |
CG13947-PA | 119 | CG13947-PA | 1..113 | 1..107 | 361 | 67.3 | Plus |
lcs-PA | 145 | CG12794-PA | 1..128 | 1..107 | 171 | 38 | Plus |
CG10918-PA | 183 | CG10918-PA | 1..143 | 1..107 | 140 | 33.1 | Plus |