Clone BS24711 Report

Search the DGRC for BS24711

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:247
Well:11
Vector:pDNR-Dual
Associated Gene/TranscriptCG30016-RA
Protein status:BS24711.pep: full length peptide match
Sequenced Size:374

Clone Sequence Records

BS24711.complete Sequence

374 bp assembled on 2011-06-21

GenBank Submission: KX801704

> BS24711.complete
GAAGTTATCAGTCGACATGGATGCACGAAAGTTTTCTACCCACATATTGG
ATACTTCGGTGGGAAAGGCGGCAGCCAATGTGAGAGTAACAGTTTCCAGG
CTGGACGAGATTCAGGAATGGAGATCCCTTCGGGCGGCCCAAACTGATGC
GGATGGTCGCTGCCTGCTCTTGGAACCTGGTCAATTTCCCGGCGGGATCT
ATAAGCTGACCTTTCACGTGGGCGCCTATTACGCGGAGCGCAATGTGAGG
ACACTTTATCCAGCAATTGACTTGATTGTGGATTGCAGTGAGAATCAGAA
CTATCACATTCCTTTGTTACTCAATCCCTTTGGGTATTCCACATATCGTG
GAACATAGAAGCTTTCTAGACCAT

BS24711.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:19:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG30016-RA 342 CG30016-PA 1..342 17..358 1710 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:19:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG30016-RA 446 CG30016-RA 22..363 17..358 1710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:19:09
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10874975..10875284 358..49 1550 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:19:10 has no hits.

BS24711.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-21 11:32:46 Download gff for BS24711.complete
Subject Subject Range Query Range Percent Splice Strand
CG30016-RA 22..363 17..358 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:20 Download gff for BS24711.complete
Subject Subject Range Query Range Percent Splice Strand
CG30016-RA 22..363 17..358 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:54 Download gff for BS24711.complete
Subject Subject Range Query Range Percent Splice Strand
CG30016-RA 22..363 17..358 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:54 Download gff for BS24711.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10874975..10875283 50..358 100 <- Minus
2R 10875339..10875371 17..49 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:20 Download gff for BS24711.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6762480..6762788 50..358 100 <- Minus
arm_2R 6762844..6762876 17..49 100   Minus

BS24711.pep Sequence

Translation from 16 to 357

> BS24711.pep
MDARKFSTHILDTSVGKAAANVRVTVSRLDEIQEWRSLRAAQTDADGRCL
LLEPGQFPGGIYKLTFHVGAYYAERNVRTLYPAIDLIVDCSENQNYHIPL
LLNPFGYSTYRGT*

BS24711.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:33:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG30016-PA 113 CG30016-PA 1..113 1..113 595 100 Plus