BS24712.complete Sequence
449 bp assembled on 2011-06-17
GenBank Submission: KX806418
> BS24712.complete
GAAGTTATCAGTAGACATGTCCGCCACCCTACGTCTTCTCTGCCTGATGG
CCTGCTGCGTCGCCCTGGCTGTGGCCAATCGCCCCAACTACGGCGGATCC
GGATACGGAGCCAGCTACGGCGATGTGGTTAAGGCCGCTGAGACCGCCGA
GGCTCAGGCTTCTGCCCTGACCAACGCTGCCGGAGCAGCTGCCTCCGCCG
CCAAGCTGGACGGTGCTGACTGGAATTCCCTCAACCGTTATGGATGGGAG
CAGGGTCGCCCACTTTTGGCCAAGCCCTACGGCCCTCTGGACCCGCTATA
CGCTGCTGCTCTGCCACCACGCTCCTTCGTGGCTGAGGTCGATCCAGTCT
TCAAGAAGAGCCAATACGGCGGATCTTACGGCGAGAATGCGTACCTGAAG
ACCGACGCCAAACTGGGTGTTGTGGCCATCTAAAAGCTTTCTAGACCAT
BS24712.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:43:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cp16-RA | 417 | CG6533-PA | 1..417 | 17..433 | 2085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:43:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cp16-RA | 522 | CG6533-RA | 48..470 | 17..439 | 2100 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:42:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8731991..8732321 | 17..347 | 1655 | 100 | Plus |
3L | 28110227 | 3L | 8732453..8732547 | 345..439 | 460 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:42:59 has no hits.
BS24712.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:12 Download gff for
BS24712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cp16-RA | 250..664 | 17..431 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:05 Download gff for
BS24712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cp16-RA | 48..462 | 17..431 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:53 Download gff for
BS24712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cp16-RA | 48..462 | 17..431 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:53 Download gff for
BS24712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8731991..8732321 | 17..347 | 100 | -> | Plus |
3L | 8732456..8732539 | 348..431 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:05 Download gff for
BS24712.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8725091..8725421 | 17..347 | 100 | -> | Plus |
arm_3L | 8725556..8725639 | 348..431 | 100 | | Plus |
BS24712.pep Sequence
Translation from 16 to 432
> BS24712.pep
MSATLRLLCLMACCVALAVANRPNYGGSGYGASYGDVVKAAETAEAQASA
LTNAAGAAASAAKLDGADWNSLNRYGWEQGRPLLAKPYGPLDPLYAAALP
PRSFVAEVDPVFKKSQYGGSYGENAYLKTDAKLGVVAI*
BS24712.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:19:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cp16-PA | 138 | CG6533-PA | 1..138 | 1..138 | 714 | 100 | Plus |