Clone BS24715 Report

Search the DGRC for BS24715

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:247
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptCp19-RA
Protein status:BS24715.pep: full length peptide match
Sequenced Size:554

Clone Sequence Records

BS24715.complete Sequence

554 bp assembled on 2011-06-17

GenBank Submission: KX801753

> BS24715.complete
GAAGTTATCAGTCGACATGAACAAGTTCGCTACTCTGGCAGTCATCTTCT
GCGCCTGCATCGTGGGCAGCTGCTACGCCAACTACGGTGGCCAGCAGAGC
TACGGACAGCGATCTTACGGTCAGGATAGCTCCGCCGCCTCCGCCGCCAG
CTCAGCAGCTGCTGCTGGAGCCGAGGGTCAGCAGCGTTATGAGCGCCCCG
TGGAGATCATCGCCGGCGGTTACCGCGGCAGCTATGCCCCCGAGATCCTG
CGTCCCATCCAGGTCAGCGGTGGATATGGCGGTGAGCGACGTGGCTACAA
CGGTGGCAACTACCGTCGTGCCGGCTACGGACCCCGTTGGACTGTCCAGC
CCGCCGGTGCCACCCTCCTGTACCCCGGCCAGAACAACTACAAGGCTTAC
GTCTCGCCCCCGGAGTACAGCAAGGTGATCCTGCCCATCCGCCCTGCTGC
TCCAGTGGCCAAGCTTTTCGTCCCAGAGAACCAGTATGGCAACCAGTACG
TTAGCCAGTACTCTGCACCCCGCAGCAGCGGCTACTAAAAGCTTTCTAGA
CCAT

BS24715.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:43:26
Subject Length Description Subject Range Query Range Score Percent Strand
Cp19-RA 522 CG6524-PA 1..522 17..538 2610 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:43:27
Subject Length Description Subject Range Query Range Score Percent Strand
Cp19-RA 651 CG6524-RA 43..565 16..538 2615 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:43:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8730012..8730518 32..538 2535 100 Plus
Blast to na_te.dros performed on 2014-11-26 14:43:24 has no hits.

BS24715.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:15 Download gff for BS24715.complete
Subject Subject Range Query Range Percent Splice Strand
Cp19-RA 44..563 17..536 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:14 Download gff for BS24715.complete
Subject Subject Range Query Range Percent Splice Strand
Cp19-RA 44..563 17..536 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:00 Download gff for BS24715.complete
Subject Subject Range Query Range Percent Splice Strand
Cp19-RA 44..563 17..536 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:00 Download gff for BS24715.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8730012..8730516 32..536 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:14 Download gff for BS24715.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8723112..8723616 32..536 100   Plus

BS24715.pep Sequence

Translation from 16 to 537

> BS24715.pep
MNKFATLAVIFCACIVGSCYANYGGQQSYGQRSYGQDSSAASAASSAAAA
GAEGQQRYERPVEIIAGGYRGSYAPEILRPIQVSGGYGGERRGYNGGNYR
RAGYGPRWTVQPAGATLLYPGQNNYKAYVSPPEYSKVILPIRPAAPVAKL
FVPENQYGNQYVSQYSAPRSSGY*

BS24715.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:20:02
Subject Length Description Subject Range Query Range Score Percent Strand
Cp19-PA 173 CG6524-PA 1..173 1..173 919 100 Plus