BS24717.complete Sequence
551 bp assembled on 2011-06-17
GenBank Submission: KX802478
> BS24717.complete
GAAGTTATCAGTCGACATGATGAAGTTCATGTGCATCTGCCTCTGCGCCA
TCTCTGCCGTTTCGGCCAACTCCTACGGACGTTCCCGTGGTGGATACGGT
GGTGCCCCAGTCGGTGGCTATGCCTACCAGGTGCAGCCTGCCCTGACCGT
TAAGGCGATCGTTCCCTCATACGGTGGTGGATACGGCGGAAACCATGGAG
GATATGGCGGTGCCTACGAGTCGGTGCCTGTGCCCGTGTCCTCTGCCTAC
AGCGGTGCCAATGTGGGATCTCAGTACTCCGGTTCCGGCTACGGCGGTGC
CCCACCAGTTGATGCCCAGGCCATTGCCCTCGCCAAGCTCGCCCTGGCCG
CTCCCAGCGCTGGAGCTCCTCTGGTCTGGAAGGAGGCTCCCCGCTACGCC
CAGCCCGTCTATCCCCCCACCAGCTACGTGAACCAGGAGTACGGACACAG
CGAGAAGGTGAAGGGAGGCTCCGCAGCCGCTGCTGCCAGCTCCGTGGCCG
CCGGAAAGAAGGGCTACAAGAGGCCCAGCTACTAAAAGCTTTCTAGACCA
T
BS24717.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:43:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cp18-RA | 519 | CG6517-PA | 1..519 | 17..535 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:43:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cp18-RA | 649 | CG6517-RA | 45..563 | 17..535 | 2595 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:43:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8727023..8727527 | 31..535 | 2525 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:43:42 has no hits.
BS24717.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:16 Download gff for
BS24717.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cp18-RA | 45..561 | 17..533 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:19 Download gff for
BS24717.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cp18-RA | 45..561 | 17..533 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:05 Download gff for
BS24717.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cp18-RA | 45..561 | 17..533 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:05 Download gff for
BS24717.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8727024..8727525 | 32..533 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:19 Download gff for
BS24717.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8720124..8720625 | 32..533 | 100 | | Plus |
BS24717.pep Sequence
Translation from 16 to 534
> BS24717.pep
MMKFMCICLCAISAVSANSYGRSRGGYGGAPVGGYAYQVQPALTVKAIVP
SYGGGYGGNHGGYGGAYESVPVPVSSAYSGANVGSQYSGSGYGGAPPVDA
QAIALAKLALAAPSAGAPLVWKEAPRYAQPVYPPTSYVNQEYGHSEKVKG
GSAAAAASSVAAGKKGYKRPSY*
BS24717.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:20:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cp18-PA | 172 | CG6517-PA | 1..172 | 1..172 | 907 | 100 | Plus |
CG14191-PA | 193 | CG14191-PA | 55..155 | 21..116 | 139 | 35.6 | Plus |