BS24718.complete Sequence
1015 bp assembled on 2011-06-17
GenBank Submission: KX800695
> BS24718.complete
GAAGTTATCAGTCGACATGAGAGTGCGCCTGACTTTGCTAACGATATGCA
TTTACCTATGCGCGGCTGCAGCTGAGGATCTGGACTCCATCCATGAGATC
CGCAGTGAGGTGGAGGAGCTGATCAAAGGTACGGAGGAGCTAAACCATGG
GCTGCAGAAAGTGAAGGACGTGCAGAAGGGCATTGAAGAGAAGTTCAAGC
ATCAGCGCGACGAGATCGAACTCATTGCTGGATTGGAGGTTGCCATAGCC
AAGCTGGAATCGAACGTTCAAAGCAGCTTCCAAGCCACGGCCTCTGGAGT
GGGAAATTTGACAGCCATTGTTAACGCAATCCAGGGTCAGAATGAAAACT
CTATTAGGAATCTTACCAAAGTGGAGCTAGAAATCAGGAAAGCCCTGGAA
CAAGTGGCTGCCAATCAGAACAAATACGAGCAGAACCTAAATGAAGTGGC
CTCATCCGTCAACTCGCATCTGTCGGAGATTCAGCAGCTGCTATCACAGG
CCGTCATAGGGGAACTCATCGGCTTGGACAATAAAGCGAAGGTCCTCCAG
GAGCAGCAGCGCAACATCGTGGGTCAAGTGGGATATCTGGGCGAACTTAA
GGCTCTGGCAGATCGTGCCAATCGCAAAGTCAATCAATTGGAGTGGGGTC
TGGTCATTCTCAACCGCACTCAGTCCGAGAGCCTCAACAGCATCGAGCAC
ACTGTCCATGGAGTGCAGGTGGCCACCTCACAGGTCGATCATAAACTGGC
TGCCCTACTGAACAATCAGAAGAACATTGAAAGGACGCTGGATGGCTGCA
AGCACAAAAATCCGTCACACCAGAAGCCCCACGAGATCTGGACTCACCCG
GAACACGCACCAATTTACAAGCCAAAACCAGAGGGCAATCAAGGATACGA
GAACGTCTATGCATCCCAAGAAGAGGCTGAATACCTATACAAACTTTGGT
ATGGAAAGGGCCAGTAGAAGCTTTCTAGACCATTCGTTTGGCGCGCGGAA
GGGAGGTAAGTGGTC
BS24718.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:43:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13083-RB | 951 | CG13083-PB | 1..951 | 17..967 | 4740 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:43:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13083-RB | 1145 | CG13083-RB | 34..985 | 16..967 | 4745 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:43:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19487523..19488378 | 16..871 | 4265 | 99.9 | Plus |
| 2L | 23513712 | 2L | 19488435..19488531 | 871..967 | 485 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:43:47 has no hits.
BS24718.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:17 Download gff for
BS24718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13083-RB | 35..989 | 17..973 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:21 Download gff for
BS24718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13083-RB | 35..989 | 17..973 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:06 Download gff for
BS24718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13083-RB | 35..989 | 17..973 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:06 Download gff for
BS24718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19487524..19488377 | 17..870 | 99 | -> | Plus |
| 2L | 19488435..19488535 | 871..973 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:21 Download gff for
BS24718.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19487524..19488377 | 17..870 | 99 | -> | Plus |
| arm_2L | 19488435..19488535 | 871..973 | 97 | | Plus |
BS24718.pep Sequence
Translation from 16 to 966
> BS24718.pep
MRVRLTLLTICIYLCAAAAEDLDSIHEIRSEVEELIKGTEELNHGLQKVK
DVQKGIEEKFKHQRDEIELIAGLEVAIAKLESNVQSSFQATASGVGNLTA
IVNAIQGQNENSIRNLTKVELEIRKALEQVAANQNKYEQNLNEVASSVNS
HLSEIQQLLSQAVIGELIGLDNKAKVLQEQQRNIVGQVGYLGELKALADR
ANRKVNQLEWGLVILNRTQSESLNSIEHTVHGVQVATSQVDHKLAALLNN
QKNIERTLDGCKHKNPSHQKPHEIWTHPEHAPIYKPKPEGNQGYENVYAS
QEEAEYLYKLWYGKGQ*
BS24718.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:20:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13083-PB | 316 | CG13083-PB | 1..316 | 1..316 | 1605 | 100 | Plus |
| CG13084-PA | 454 | CG13084-PA | 1..308 | 1..306 | 212 | 22.7 | Plus |
