Clone BS24723 Report

Search the DGRC for BS24723

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:247
Well:23
Vector:pDNR-Dual
Associated Gene/TranscriptCp7Fc-RA
Protein status:BS24723.pep: full length peptide match
Sequenced Size:1033

Clone Sequence Records

BS24723.complete Sequence

1033 bp assembled on 2011-06-17

GenBank Submission: KX804454

> BS24723.complete
GAAGTTATCAGTCCACATGGCAGCCGACGGCAGTTGGCCTATACTACTCT
TGTTGGTCTCAACACAGGCCATTATTCACGCTGAGAATCTAAGTGAATCC
ACGCCCGGCCCCGATGAGGAATACAATGTGAGCACTACTCCGGGTGCGCC
GCTGGAAGAGACCACCAATCGCTTGGCTGCTCGCGTTGAGCCATACGATA
AGGGTGATCGGGAGCAGTACGATGTGATCGATGTGGCCACAGCTACCGGT
ACGGTGATGGGCAAGCCCAGAAGTGGACAGACCACGAGAATCTACACCAC
CGGCGAAGTGGACGAAAGCTTTTGGCTAAAGCATCTTGGCGATGACTTCA
AACATGCCATCCATCTGCAGGTGGGCGGCACCAACGAAGAGTACAATCGC
CTGATTAACCGGACCCAGAACGGTGTCCACGAGGAGGTGCATCACGAGTA
TTTACCGGGGGCCGAACGACCTGGCAGCGCAGTCCAGCCTCCGTCTCCTC
TACCTGCGCCACACCAATCGCGTCCAGCTTATCGTCAGGGTTTCGACAAT
CGAGCCATGGCCATGAAACAGCAGTATCTCATCCATCAGCAGACCCAGCA
ATCGCATCCTGCCCAGCAACGCTATAACTATGCCCAACAGCATGCACAAC
ACTATGCACCACAACCACAACTGCAACCGCAACCACAACCACAACCACAA
TACCCACAGCACACACCGCACAGAAACACGTATGCAATGCCTCAGAATTA
TGGGCAGCAGAACTACAAGCCGCAGAGTTATATTATCAACTCTAGCGAAG
ATCAGCTGCACGCCGAGCAATCGAATCCCTCGCCAATGAAATCAGCTGGA
GAGGATCGACAACATCACGAGGAGGAGTTTGACTCCTTTGGCGGTCAGCT
CAACTTCAAATCACCCTTCAATGACTACGGCAGTCGACCAGCACGAGATC
TCACCTACCTTCTTTATAAGCGGGGTCTTTAGAAGCTTTCTAGACCTATT
CGTGTTGGCGCGGCGGGGCAAGGCGGGGGGGTT

BS24723.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:43:21
Subject Length Description Subject Range Query Range Score Percent Strand
Cp7Fc-RA 966 CG15351-PA 1..966 17..982 4770 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:43:22
Subject Length Description Subject Range Query Range Score Percent Strand
Cp7Fc-RA 1132 CG15351-RA 2..981 8..987 4810 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:43:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8477266..8478169 84..987 4460 99.6 Plus
X 23542271 X 8477118..8477195 8..85 360 97.4 Plus
Blast to na_te.dros performed on 2014-11-26 14:43:20 has no hits.

BS24723.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-17 17:47:14 Download gff for BS24723.complete
Subject Subject Range Query Range Percent Splice Strand
Cp7Fc-RA 11..981 17..987 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:13 Download gff for BS24723.complete
Subject Subject Range Query Range Percent Splice Strand
Cp7Fc-RA 11..981 17..987 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:58 Download gff for BS24723.complete
Subject Subject Range Query Range Percent Splice Strand
Cp7Fc-RA 11..981 17..987 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:58 Download gff for BS24723.complete
Subject Subject Range Query Range Percent Splice Strand
X 8477127..8477195 17..85 100 -> Plus
X 8477268..8478169 86..987 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:13 Download gff for BS24723.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8371160..8371228 17..85 100 -> Plus
arm_X 8371301..8372202 86..987 99   Plus

BS24723.pep Sequence

Translation from 16 to 981

> BS24723.pep
MAADGSWPILLLLVSTQAIIHAENLSESTPGPDEEYNVSTTPGAPLEETT
NRLAARVEPYDKGDREQYDVIDVATATGTVMGKPRSGQTTRIYTTGEVDE
SFWLKHLGDDFKHAIHLQVGGTNEEYNRLINRTQNGVHEEVHHEYLPGAE
RPGSAVQPPSPLPAPHQSRPAYRQGFDNRAMAMKQQYLIHQQTQQSHPAQ
QRYNYAQQHAQHYAPQPQLQPQPQPQPQYPQHTPHRNTYAMPQNYGQQNY
KPQSYIINSSEDQLHAEQSNPSPMKSAGEDRQHHEEEFDSFGGQLNFKSP
FNDYGSRPARDLTYLLYKRGL*

BS24723.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:19:55
Subject Length Description Subject Range Query Range Score Percent Strand
Cp7Fc-PA 321 CG15351-PA 1..321 1..321 1739 100 Plus