BS24730.complete Sequence
923 bp assembled on 2011-06-21
GenBank Submission: KX805508
> BS24730.complete
GAAGTTATCAGTCGACATGTTTTCGATCAGAGTGTGGTTCATCTGCCTGG
TGATAGTTACCCTCAACTCCTTTCCCGCCTACTCCTGGGATTATTGCCAA
GAGCACTGGTGTCCGCGTTCCACCGACCACGTAGCGTGCAACAACAACGG
GACGTTTGGCCTCGATTGCGGAAGGGAGGCCAGGCTAATCCCGCTCAGCA
ATCAGTTGCAGGCGTTCATTGTGCACCAGGTAAACTTCTATCGCAACCAG
GTGGCTTCGGGCGGACTCTCCGCCTTCGGACCCGCCCGCCGAATGGCTAG
TGTCCGCTGGGATCCCGAGCTGGCACAGCTGGCTGAGCTGGCGGCAAAGA
GGTGCAGTTTGTCCGGCGATGGATGCCGCAACACCAGGCGATTCAAGCAC
GTGGGCCAGCTGACGGGCCACGTAATCTTCAGTGCGGGAAAGCACAGCGA
CTTGGAGCTGCTGCGCCACAAGATCTCGAATTGGTTTGGCCAGTACATGA
GAGCCAGCAAGGATCTGCAAGCCGCCGATCCATCAAGCAACATCAGCAGC
TTCCGGCAGTTGATACAGGAAAGCTCCACCCACATGGGATGCGGCGTGCT
CCGCCAGAGGAGCCACATGCTGTGGCACCAGCAGTTCATCGTCTGTAACT
TTGCCCGTAGGAATATGCCCCGCGAGCAGGTCTACCAGGTGGGCGTGGCT
GCCACAGGATGCAGGTCGGGAAGGAATCCTCGCTATCCCAATCTCTGCGC
TCTGCAGGAAGAATACGATGTGAACGCCGTCGACCGTTTTCACTCAAAGC
GGCCACTTAGGATAAGGTTCAAGTACAGCGCATCCCATCCATCGAAAGTT
TTGGGTGCTGATCGTGATGTAGCCTTCCATCCCAATATCAAGTTGGGACG
TCTTTAAAAGCTTTCTAGACCAT
BS24730.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:25:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3640-RA | 891 | CG3640-PA | 1..891 | 17..907 | 4455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:25:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3640-RA | 994 | CG3640-RA | 9..899 | 17..907 | 4455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:25:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24639905..24640661 | 151..907 | 3785 | 100 | Plus |
2R | 25286936 | 2R | 24639696..24639830 | 17..151 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:25:19 has no hits.
BS24730.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-21 15:35:21 Download gff for
BS24730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3640-RA | 16..897 | 24..905 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:35 Download gff for
BS24730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3640-RA | 16..897 | 24..905 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:12:48 Download gff for
BS24730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3640-RA | 16..897 | 24..905 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:12:48 Download gff for
BS24730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24639703..24639830 | 24..151 | 100 | -> | Plus |
2R | 24639906..24640659 | 152..905 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:35 Download gff for
BS24730.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20527226..20527353 | 24..151 | 100 | -> | Plus |
arm_2R | 20527429..20528182 | 152..905 | 100 | | Plus |
BS24730.pep Sequence
Translation from 16 to 906
> BS24730.pep
MFSIRVWFICLVIVTLNSFPAYSWDYCQEHWCPRSTDHVACNNNGTFGLD
CGREARLIPLSNQLQAFIVHQVNFYRNQVASGGLSAFGPARRMASVRWDP
ELAQLAELAAKRCSLSGDGCRNTRRFKHVGQLTGHVIFSAGKHSDLELLR
HKISNWFGQYMRASKDLQAADPSSNISSFRQLIQESSTHMGCGVLRQRSH
MLWHQQFIVCNFARRNMPREQVYQVGVAATGCRSGRNPRYPNLCALQEEY
DVNAVDRFHSKRPLRIRFKYSASHPSKVLGADRDVAFHPNIKLGRL*
BS24730.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:33:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3640-PA | 296 | CG3640-PA | 1..296 | 1..296 | 1596 | 100 | Plus |
CG17575-PA | 291 | CG17575-PA | 6..283 | 7..251 | 427 | 34.2 | Plus |
CG17575-PB | 298 | CG17575-PB | 6..290 | 7..251 | 420 | 33.3 | Plus |
CG42564-PA | 500 | CG10284-PA | 54..284 | 25..251 | 357 | 34.7 | Plus |
CG9822-PA | 263 | CG9822-PA | 13..259 | 11..253 | 345 | 33.2 | Plus |